Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 RPL32P9-201ENST00000487963 407 ntBASIC4.56□□□□□ -1.68
LMO4P61968 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AC098483.2-201ENST00000603158 454 ntBASIC4.56□□□□□ -1.68
LMO4P61968 AC004908.3-201ENST00000610248 625 ntBASIC4.56□□□□□ -1.68
LMO4P61968 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.56□□□□□ -1.68
LMO4P61968 AC037198.3-201ENST00000616754 526 ntBASIC4.56□□□□□ -1.68
LMO4P61968 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.56□□□□□ -1.68
LMO4P61968 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 MRRFP1-201ENST00000435941 1675 ntBASIC4.56□□□□□ -1.68
LMO4P61968 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 AC011503.2-201ENST00000594230 1500 ntBASIC4.56□□□□□ -1.68
LMO4P61968 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LMO4P61968 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 AC140479.2-201ENST00000421567 3130 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AC011933.2-201ENST00000578539 2790 ntBASIC4.55□□□□□ -1.68
LMO4P61968 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 ZNF658B-201ENST00000602828 3408 ntBASIC4.55□□□□□ -1.68
LMO4P61968 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.55□□□□□ -1.68
LMO4P61968 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.55□□□□□ -1.68
LMO4P61968 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 AL121886.1-201ENST00000358609 435 ntBASIC4.55□□□□□ -1.68
LMO4P61968 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 RNU4-23P-201ENST00000362839 140 ntBASIC4.55□□□□□ -1.68
LMO4P61968 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 AL133388.1-201ENST00000404509 287 ntBASIC4.55□□□□□ -1.68
LMO4P61968 RN7SKP273-201ENST00000411392 314 ntBASIC4.55□□□□□ -1.68
LMO4P61968 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 METTL15P3-201ENST00000415522 1221 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 SRSF1P1-201ENST00000424058 520 ntBASIC4.55□□□□□ -1.68
LMO4P61968 RPL17P35-201ENST00000432217 549 ntBASIC4.55□□□□□ -1.68
LMO4P61968 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 AC114878.1-201ENST00000441166 358 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.55□□□□□ -1.68
LMO4P61968 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.55□□□□□ -1.68
LMO4P61968 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.55□□□□□ -1.68
LMO4P61968 RN7SL222P-201ENST00000476452 299 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AC025181.1-201ENST00000477507 416 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.55□□□□□ -1.68
LMO4P61968 AC110760.3-202ENST00000515177 371 ntBASIC4.55□□□□□ -1.68
LMO4P61968 RN7SKP248-201ENST00000516278 305 ntBASIC4.55□□□□□ -1.68
LMO4P61968 SCARNA16.4-201ENST00000516956 187 ntBASIC4.55□□□□□ -1.68
LMO4P61968 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.55□□□□□ -1.68
LMO4P61968 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.55□□□□□ -1.68
LMO4P61968 CR383656.14-201ENST00000551951 406 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AC018558.5-201ENST00000565840 952 ntBASIC4.55□□□□□ -1.68
LMO4P61968 MTND2P13-201ENST00000577438 1039 ntBASIC4.55□□□□□ -1.68
LMO4P61968 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.55□□□□□ -1.68
LMO4P61968 AC242628.1-201ENST00000606810 391 ntBASIC4.55□□□□□ -1.68
LMO4P61968 MIR7155-201ENST00000615925 56 ntBASIC4.55□□□□□ -1.68
LMO4P61968 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LMO4P61968 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 AC068870.1-201ENST00000563737 2455 ntBASIC4.55□□□□□ -1.68
LMO4P61968 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LMO4P61968 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO4P61968 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms