Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.77□□□□□ -1.33
RHBDL3P58872 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 AL353796.1-201ENST00000561542 3241 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 RNA5SP183-201ENST00000362452 119 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RHBDL3P58872 DPPA2P3-201ENST00000411853 655 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 RPS6P23-201ENST00000413224 722 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC023141.6-201ENST00000429418 337 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 NDUFA5P10-201ENST00000432147 357 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 MYO5BP2-201ENST00000449815 1277 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AL133244.1-201ENST00000456007 258 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 MTND2P30-201ENST00000456663 382 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC026348.1-201ENST00000462549 1053 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 BX510359.5-201ENST00000515651 304 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.76□□□□□ -1.33
RHBDL3P58872 NOP56P3-201ENST00000549457 385 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC233266.2-201ENST00000567067 528 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.76□□□□□ -1.33
RHBDL3P58872 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.76□□□□□ -1.33
RHBDL3P58872 MIR4443-201ENST00000585052 53 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.76□□□□□ -1.33
RHBDL3P58872 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.76□□□□□ -1.33
RHBDL3P58872 AL671309.1-201ENST00000603750 544 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 RPL21P136-201ENST00000605378 396 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC132068.1-201ENST00000623805 459 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 AC021106.3-201ENST00000623925 531 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.76□□□□□ -1.33
RHBDL3P58872 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
RHBDL3P58872 NXF4-202ENST00000416098 1465 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 HSPD1P8-201ENST00000400121 1658 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
RHBDL3P58872 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.76□□□□□ -1.33
RHBDL3P58872 AC087516.1-201ENST00000561236 2428 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.76□□□□□ -1.33
RHBDL3P58872 AC068446.1-201ENST00000556425 1549 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RHBDL3P58872 AC079753.1-201ENST00000623243 3868 ntBASIC6.76□□□□□ -1.33
RHBDL3P58872 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC022164.1-201ENST00000568767 2673 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC016745.2-201ENST00000608834 3443 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC093775.1-201ENST00000624154 1868 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 ZNF733P-202ENST00000444809 1573 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC017099.1-201ENST00000448261 1028 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 RPS23P2-201ENST00000463671 415 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 RN7SL583P-201ENST00000475692 287 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC090638.1-201ENST00000498296 909 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.75□□□□□ -1.33
RHBDL3P58872 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 KATNBL1P5-201ENST00000605015 517 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 AC005840.5-201ENST00000619166 599 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 AC006213.5-201ENST00000619673 288 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 AC145207.9-201ENST00000623802 325 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC009779.8-201ENST00000641684 4384 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.75□□□□□ -1.33
RHBDL3P58872 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RHBDL3P58872 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 AC027228.2-201ENST00000567141 2154 ntBASIC6.75□□□□□ -1.33
RHBDL3P58872 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms