Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GLUD1P3-202ENST00000508551 200 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.98□□□□□ -1.45
VCPP55072 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 MRPS16P1-201ENST00000523462 412 ntBASIC5.98□□□□□ -1.45
VCPP55072 AL512310.9-201ENST00000553311 948 ntBASIC5.98□□□□□ -1.45
VCPP55072 AL049779.2-201ENST00000553847 315 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.98□□□□□ -1.45
VCPP55072 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.98□□□□□ -1.45
VCPP55072 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.98□□□□□ -1.45
VCPP55072 MIR4330-201ENST00000579077 105 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC016252.1-201ENST00000609721 474 ntBASIC5.98□□□□□ -1.45
VCPP55072 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.98□□□□□ -1.45
VCPP55072 AL445528.2-201ENST00000620582 470 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC005618.4-201ENST00000625053 554 ntBASIC5.98□□□□□ -1.45
VCPP55072 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VCPP55072 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VCPP55072 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
VCPP55072 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VCPP55072 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.97□□□□□ -1.45
VCPP55072 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
VCPP55072 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 AC112255.1-201ENST00000624070 2493 ntBASIC5.97□□□□□ -1.45
VCPP55072 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.97□□□□□ -1.45
VCPP55072 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VCPP55072 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.97□□□□□ -1.45
VCPP55072 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.97□□□□□ -1.45
VCPP55072 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.97□□□□□ -1.45
VCPP55072 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.97□□□□□ -1.45
VCPP55072 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.97□□□□□ -1.45
VCPP55072 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.97□□□□□ -1.45
VCPP55072 RPS11P7-201ENST00000442125 465 ntBASIC5.97□□□□□ -1.45
VCPP55072 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.97□□□□□ -1.45
VCPP55072 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.97□□□□□ -1.45
VCPP55072 AC090602.1-201ENST00000469695 252 ntBASIC5.97□□□□□ -1.45
VCPP55072 RPS17P15-201ENST00000475609 349 ntBASIC5.97□□□□□ -1.45
VCPP55072 RPS21P4-201ENST00000487122 248 ntBASIC5.97□□□□□ -1.45
VCPP55072 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.97□□□□□ -1.45
VCPP55072 AC111000.6-201ENST00000514471 709 ntBASIC5.97□□□□□ -1.45
VCPP55072 GAPDHP62-201ENST00000515313 990 ntBASIC5.97□□□□□ -1.45
VCPP55072 AC021146.10-201ENST00000515628 706 ntBASIC5.97□□□□□ -1.45
VCPP55072 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.97□□□□□ -1.45
VCPP55072 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.97□□□□□ -1.45
VCPP55072 AC079075.1-201ENST00000559543 878 ntBASIC5.97□□□□□ -1.45
VCPP55072 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.97□□□□□ -1.45
VCPP55072 AL353729.2-201ENST00000605859 1249 ntBASIC5.97□□□□□ -1.45
VCPP55072 AL022394.1-201ENST00000606979 292 ntBASIC5.97□□□□□ -1.45
VCPP55072 RNU6-84P-201ENST00000607737 102 ntBASIC5.97□□□□□ -1.45
VCPP55072 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VCPP55072 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VCPP55072 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.97□□□□□ -1.45
VCPP55072 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VCPP55072 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
VCPP55072 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
VCPP55072 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
VCPP55072 AP005435.3-201ENST00000531260 3198 ntBASIC5.96□□□□□ -1.45
VCPP55072 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.96□□□□□ -1.45
VCPP55072 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.96□□□□□ -1.45
VCPP55072 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VCPP55072 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
VCPP55072 CASC19-255ENST00000641733 1385 ntBASIC5.96□□□□□ -1.45
VCPP55072 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
VCPP55072 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VCPP55072 AL159987.1-201ENST00000347911 293 ntBASIC5.96□□□□□ -1.46
VCPP55072 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 RNA5SP319-201ENST00000362768 119 ntBASIC5.96□□□□□ -1.46
VCPP55072 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.96□□□□□ -1.46
VCPP55072 RMRPP5-201ENST00000411156 267 ntBASIC5.96□□□□□ -1.46
VCPP55072 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.96□□□□□ -1.46
VCPP55072 GABARAPL3-201ENST00000412799 354 ntBASIC5.96□□□□□ -1.46
VCPP55072 AC019205.1-201ENST00000421830 730 ntBASIC5.96□□□□□ -1.46
VCPP55072 MGAT2P2-201ENST00000427194 797 ntBASIC5.96□□□□□ -1.46
VCPP55072 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.96□□□□□ -1.46
VCPP55072 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.96□□□□□ -1.46
VCPP55072 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.96□□□□□ -1.46
VCPP55072 RPS18P6-201ENST00000476880 458 ntBASIC5.96□□□□□ -1.46
VCPP55072 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.96□□□□□ -1.46
VCPP55072 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.96□□□□□ -1.46
VCPP55072 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.96□□□□□ -1.46
VCPP55072 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms