Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
COPB1P53618 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.13□□□□□ -1.43
COPB1P53618 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COPB1P53618 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 AC093671.1-201ENST00000624981 2929 ntBASIC6.13□□□□□ -1.43
COPB1P53618 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 RNU1-150P-201ENST00000362491 162 ntBASIC6.13□□□□□ -1.43
COPB1P53618 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COPB1P53618 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.13□□□□□ -1.43
COPB1P53618 RIMKLBP2-201ENST00000424737 654 ntBASIC6.13□□□□□ -1.43
COPB1P53618 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 AC110602.1-201ENST00000437414 318 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AMYP1-201ENST00000440059 1023 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.13□□□□□ -1.43
COPB1P53618 RN7SL188P-201ENST00000469842 285 ntBASIC6.13□□□□□ -1.43
COPB1P53618 UBFD1P1-201ENST00000473259 814 ntBASIC6.13□□□□□ -1.43
COPB1P53618 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 CR383656.1-201ENST00000484916 377 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 AC021106.1-201ENST00000509020 1058 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AP001372.4-201ENST00000524889 472 ntBASIC6.13□□□□□ -1.43
COPB1P53618 OR7E10P-201ENST00000526420 991 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 AP004609.2-201ENST00000532177 190 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 AC009712.1-201ENST00000564938 316 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC027216.1-201ENST00000577726 685 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.13□□□□□ -1.43
COPB1P53618 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.13□□□□□ -1.43
COPB1P53618 CLIC4P2-201ENST00000601934 717 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.13□□□□□ -1.43
COPB1P53618 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AL355802.4-201ENST00000607635 548 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AL365181.4-201ENST00000609800 547 ntBASIC6.13□□□□□ -1.43
COPB1P53618 CR589904.2-201ENST00000612533 440 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AL445493.3-201ENST00000619568 477 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AL138955.1-201ENST00000622881 1040 ntBASIC6.13□□□□□ -1.43
COPB1P53618 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.13□□□□□ -1.43
COPB1P53618 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COPB1P53618 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPB1P53618 AC007842.1-201ENST00000597336 2039 ntBASIC6.13□□□□□ -1.43
COPB1P53618 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COPB1P53618 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
COPB1P53618 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COPB1P53618 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 RNA5SP477-201ENST00000362639 119 ntBASIC6.12□□□□□ -1.43
COPB1P53618 SNORA63.3-201ENST00000362682 132 ntBASIC6.12□□□□□ -1.43
COPB1P53618 RN7SKP69-201ENST00000365390 305 ntBASIC6.12□□□□□ -1.43
COPB1P53618 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COPB1P53618 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.12□□□□□ -1.43
COPB1P53618 AC013268.2-201ENST00000420753 337 ntBASIC6.12□□□□□ -1.43
COPB1P53618 RCC2P2-201ENST00000422174 918 ntBASIC6.12□□□□□ -1.43
COPB1P53618 RPL7P56-201ENST00000429441 717 ntBASIC6.12□□□□□ -1.43
COPB1P53618 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.12□□□□□ -1.43
COPB1P53618 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
COPB1P53618 RPL5P25-201ENST00000441148 775 ntBASIC6.12□□□□□ -1.43
COPB1P53618 IGBP1P3-201ENST00000447449 1000 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 EIF2S2P5-201ENST00000457635 968 ntBASIC6.12□□□□□ -1.43
COPB1P53618 OR9N1P-201ENST00000491296 333 ntBASIC6.12□□□□□ -1.43
COPB1P53618 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 AC091912.1-201ENST00000511351 248 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AC112198.4-201ENST00000515450 351 ntBASIC6.12□□□□□ -1.43
COPB1P53618 Y_RNA.667-201ENST00000516212 107 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.12□□□□□ -1.43
COPB1P53618 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.12□□□□□ -1.43
COPB1P53618 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 HMGN2P47-201ENST00000559378 272 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AL513548.1-201ENST00000562904 1724 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms