Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.42□□□□□ -1.38
NUP98P52948 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.42□□□□□ -1.38
NUP98P52948 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.42□□□□□ -1.38
NUP98P52948 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
NUP98P52948 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NUP98P52948 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.42□□□□□ -1.38
NUP98P52948 AC073365.1-203ENST00000641055 1992 ntBASIC6.42□□□□□ -1.38
NUP98P52948 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.42□□□□□ -1.38
NUP98P52948 AC132825.1-201ENST00000463573 2247 ntBASIC6.42□□□□□ -1.38
NUP98P52948 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.42□□□□□ -1.38
NUP98P52948 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
NUP98P52948 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NUP98P52948 RN7SKP113-201ENST00000363891 295 ntBASIC6.41□□□□□ -1.38
NUP98P52948 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 OR2AM1P-201ENST00000422137 422 ntBASIC6.41□□□□□ -1.38
NUP98P52948 RPL5P25-201ENST00000441148 775 ntBASIC6.41□□□□□ -1.38
NUP98P52948 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 AC093827.1-201ENST00000480094 861 ntBASIC6.41□□□□□ -1.38
NUP98P52948 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 AC108043.1-201ENST00000512696 574 ntBASIC6.41□□□□□ -1.38
NUP98P52948 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.41□□□□□ -1.38
NUP98P52948 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 AC010632.3-201ENST00000611377 369 ntBASIC6.41□□□□□ -1.38
NUP98P52948 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 SNORA2.3-201ENST00000383920 135 ntBASIC6.41□□□□□ -1.38
NUP98P52948 MIR192-201ENST00000384915 110 ntBASIC6.41□□□□□ -1.38
NUP98P52948 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 BX276092.6-201ENST00000430476 250 ntBASIC6.41□□□□□ -1.38
NUP98P52948 H3F3BP1-201ENST00000440551 403 ntBASIC6.41□□□□□ -1.38
NUP98P52948 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 AC000111.2-201ENST00000448200 210 ntBASIC6.41□□□□□ -1.38
NUP98P52948 BX276092.8-201ENST00000455722 250 ntBASIC6.41□□□□□ -1.38
NUP98P52948 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.41□□□□□ -1.38
NUP98P52948 MORF4L1P3-201ENST00000525966 950 ntBASIC6.41□□□□□ -1.38
NUP98P52948 MIR4737-201ENST00000583979 81 ntBASIC6.41□□□□□ -1.38
NUP98P52948 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 AF230666.2-201ENST00000602328 725 ntBASIC6.41□□□□□ -1.38
NUP98P52948 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUP98P52948 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.41□□□□□ -1.38
NUP98P52948 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NUP98P52948 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.4□□□□□ -1.38
NUP98P52948 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.4□□□□□ -1.38
NUP98P52948 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NUP98P52948 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.4□□□□□ -1.38
NUP98P52948 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
NUP98P52948 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUP98P52948 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NUP98P52948 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUP98P52948 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUP98P52948 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUP98P52948 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.4□□□□□ -1.38
NUP98P52948 RPL19P16-201ENST00000433839 588 ntBASIC6.4□□□□□ -1.38
NUP98P52948 AL138878.2-201ENST00000440581 1241 ntBASIC6.4□□□□□ -1.38
NUP98P52948 AL137845.2-201ENST00000444292 988 ntBASIC6.4□□□□□ -1.38
NUP98P52948 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.4□□□□□ -1.38
NUP98P52948 IGBP1P4-201ENST00000503202 879 ntBASIC6.4□□□□□ -1.38
NUP98P52948 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.4□□□□□ -1.38
NUP98P52948 RN7SKP260-201ENST00000516907 149 ntBASIC6.4□□□□□ -1.38
NUP98P52948 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUP98P52948 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.4□□□□□ -1.38
NUP98P52948 AC011487.3-201ENST00000593607 453 ntBASIC6.4□□□□□ -1.38
NUP98P52948 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 AC079414.3-201ENST00000612986 1090 ntBASIC6.4□□□□□ -1.38
NUP98P52948 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.4□□□□□ -1.38
NUP98P52948 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
NUP98P52948 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NUP98P52948 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NUP98P52948 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NUP98P52948 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NUP98P52948 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.4□□□□□ -1.39
NUP98P52948 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms