Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL161891.1-201ENST00000621575 4636 ntBASIC7.14□□□□□ -1.27
RNF144AP50876 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF144AP50876 AP002833.3-201ENST00000625075 2265 ntBASIC7.14□□□□□ -1.27
RNF144AP50876 AL049541.2-201ENST00000626377 555 ntBASIC7.14□□□□□ -1.27
RNF144AP50876 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF144AP50876 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF144AP50876 MAPK10-290ENST00000641237 2826 ntBASIC7.14□□□□□ -1.27
RNF144AP50876 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF144AP50876 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RNF144AP50876 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RNF144AP50876 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF144AP50876 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF144AP50876 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF144AP50876 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF144AP50876 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF144AP50876 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RNF144AP50876 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 U8.3-201ENST00000363321 132 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 RNU6-1318P-201ENST00000365389 103 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 RNU6-244P-201ENST00000391028 104 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 PHBP1-201ENST00000392260 808 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 AL034372.1-201ENST00000407586 754 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 SNORA11C-201ENST00000408532 129 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 YWHAZP3-201ENST00000415292 738 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 AC073136.2-201ENST00000417282 849 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 AL513175.1-201ENST00000431492 780 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 SEPT14P3-201ENST00000439401 183 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 CICP10-201ENST00000439497 198 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AL137074.1-201ENST00000442640 465 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 AL732372.2-207ENST00000445840 183 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AL022237.1-201ENST00000446663 358 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 SEPT14P2-201ENST00000453405 183 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC099563.1-201ENST00000456086 418 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 RN7SL861P-201ENST00000473793 285 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 PA2G4P4-201ENST00000473864 1182 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC084871.2-201ENST00000503355 464 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 HMGB1P28-201ENST00000507778 552 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 SEPT14P4-201ENST00000513445 186 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC093677.1-201ENST00000514414 678 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 FO082796.1-201ENST00000523795 183 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC087280.1-201ENST00000530632 1003 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 ELOCP31-201ENST00000540463 467 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 SRMP2-201ENST00000553832 916 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.13□□□□□ -1.27
RNF144AP50876 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 RN7SL237P-201ENST00000580912 287 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC011816.2-201ENST00000607089 556 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.13□□□□□ -1.27
RNF144AP50876 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 AC010653.3-201ENST00000635332 232 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms