Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR6811-201ENST00000620409 58 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC104985.3-201ENST00000623479 597 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC138907.10-201ENST00000623708 983 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 AL355834.1-201ENST00000556602 3965 ntBASIC5.23□□□□□ -1.57
SOX2P48431 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 AC018717.1-201ENST00000457712 1505 ntBASIC5.23□□□□□ -1.57
SOX2P48431 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 AC130304.1-201ENST00000622942 2385 ntBASIC5.22□□□□□ -1.57
SOX2P48431 SPATA2P1-201ENST00000431223 2055 ntBASIC5.22□□□□□ -1.57
SOX2P48431 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SOX2P48431 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SOX2P48431 CHMP1B2P-201ENST00000399581 597 ntBASIC5.22□□□□□ -1.57
SOX2P48431 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 RNA5SP156-201ENST00000410250 110 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AL096829.1-201ENST00000413677 457 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.22□□□□□ -1.57
SOX2P48431 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 AL360013.1-201ENST00000419031 858 ntBASIC5.22□□□□□ -1.57
SOX2P48431 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 RPL5P2-201ENST00000429598 854 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 PSMD10P2-201ENST00000432890 672 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 AC234771.4-201ENST00000441416 730 ntBASIC5.22□□□□□ -1.57
SOX2P48431 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SOX2P48431 SDC4P-201ENST00000453285 601 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 AL034369.1-201ENST00000453808 477 ntBASIC5.22□□□□□ -1.57
SOX2P48431 RPL31P11-202ENST00000454082 372 ntBASIC5.22□□□□□ -1.57
SOX2P48431 RPL6P9-201ENST00000466502 859 ntBASIC5.22□□□□□ -1.57
SOX2P48431 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 RN7SL790P-201ENST00000474043 298 ntBASIC5.22□□□□□ -1.57
SOX2P48431 CR383656.1-201ENST00000484916 377 ntBASIC5.22□□□□□ -1.57
SOX2P48431 RPL21P131-201ENST00000497298 483 ntBASIC5.22□□□□□ -1.57
SOX2P48431 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 AC025459.1-201ENST00000504072 156 ntBASIC5.22□□□□□ -1.57
SOX2P48431 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 AC113420.1-201ENST00000507903 571 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC108120.2-201ENST00000512973 294 ntBASIC5.22□□□□□ -1.57
SOX2P48431 SNORA31.13-201ENST00000516624 135 ntBASIC5.22□□□□□ -1.57
SOX2P48431 RNA5SP75-201ENST00000516841 111 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC078899.1-201ENST00000521432 1185 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.22□□□□□ -1.57
SOX2P48431 LRRC6P1-201ENST00000532188 885 ntBASIC5.22□□□□□ -1.57
SOX2P48431 OR7E128P-201ENST00000532736 1024 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.22□□□□□ -1.57
SOX2P48431 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX2P48431 AL132657.2-201ENST00000564417 358 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC027796.1-201ENST00000575593 512 ntBASIC5.22□□□□□ -1.57
SOX2P48431 MIR4789-201ENST00000577469 82 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.22□□□□□ -1.57
SOX2P48431 AC119403.2-201ENST00000590960 598 ntBASIC5.22□□□□□ -1.57
SOX2P48431 GAS5-AS1-201ENST00000602767 694 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 RNU6-84P-201ENST00000607737 102 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC027506.1-201ENST00000621395 198 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AP002791.1-201ENST00000623291 381 ntBASIC5.22□□□□□ -1.57
SOX2P48431 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
SOX2P48431 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SOX2P48431 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX2P48431 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms