Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSR1P43307 GAPDHP24-201ENST00000328713 983 ntBASIC5.87□□□□□ -1.47
SSR1P43307 RNA5SP30-201ENST00000365552 115 ntBASIC5.87□□□□□ -1.47
SSR1P43307 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSR1P43307 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSR1P43307 AL009179.1-201ENST00000406085 265 ntBASIC5.87□□□□□ -1.47
SSR1P43307 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.87□□□□□ -1.47
SSR1P43307 AL022331.1-201ENST00000429025 477 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.87□□□□□ -1.47
SSR1P43307 AL512637.1-201ENST00000439523 1231 ntBASIC5.87□□□□□ -1.47
SSR1P43307 LINC02210-201ENST00000444561 288 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AC012512.1-201ENST00000446594 718 ntBASIC5.87□□□□□ -1.47
SSR1P43307 IGBP1P3-201ENST00000447449 1000 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AP006222.1-205ENST00000450734 457 ntBASIC5.87□□□□□ -1.47
SSR1P43307 RNA5SP103-201ENST00000459503 118 ntBASIC5.87□□□□□ -1.47
SSR1P43307 PSAT1P4-201ENST00000466500 526 ntBASIC5.87□□□□□ -1.47
SSR1P43307 RPS17P5-201ENST00000498293 408 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.87□□□□□ -1.47
SSR1P43307 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.87□□□□□ -1.47
SSR1P43307 RN7SKP253-201ENST00000516424 309 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AC060775.1-201ENST00000518241 520 ntBASIC5.87□□□□□ -1.47
SSR1P43307 TRIM77BP-201ENST00000524985 1119 ntBASIC5.87□□□□□ -1.47
SSR1P43307 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSR1P43307 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 AC122134.1-201ENST00000565664 1104 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.87□□□□□ -1.47
SSR1P43307 MIR4311-201ENST00000580794 100 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AC063977.5-201ENST00000601044 974 ntBASIC5.87□□□□□ -1.47
SSR1P43307 AC007786.3-201ENST00000615154 596 ntBASIC5.87□□□□□ -1.47
SSR1P43307 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSR1P43307 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSR1P43307 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.87□□□□□ -1.47
SSR1P43307 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.87□□□□□ -1.47
SSR1P43307 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.87□□□□□ -1.47
SSR1P43307 AC025574.1-201ENST00000554784 1653 ntBASIC5.87□□□□□ -1.47
SSR1P43307 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSR1P43307 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSR1P43307 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.87□□□□□ -1.47
SSR1P43307 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SSR1P43307 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.86□□□□□ -1.47
SSR1P43307 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.86□□□□□ -1.47
SSR1P43307 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.86□□□□□ -1.47
SSR1P43307 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.86□□□□□ -1.47
SSR1P43307 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSR1P43307 OR52B1P-201ENST00000316506 909 ntBASIC5.86□□□□□ -1.47
SSR1P43307 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSR1P43307 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSR1P43307 RNU1-150P-201ENST00000362491 162 ntBASIC5.86□□□□□ -1.47
SSR1P43307 RPSAP35-201ENST00000413753 818 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.86□□□□□ -1.47
SSR1P43307 RPL7P56-201ENST00000429441 717 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.86□□□□□ -1.47
SSR1P43307 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.86□□□□□ -1.47
SSR1P43307 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 RN7SL741P-201ENST00000482473 289 ntBASIC5.86□□□□□ -1.47
SSR1P43307 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.86□□□□□ -1.47
SSR1P43307 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AC113430.1-201ENST00000506872 718 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AC109481.1-201ENST00000509173 282 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 RNA5SP360-201ENST00000516555 118 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 AC024405.1-201ENST00000532521 1042 ntBASIC5.86□□□□□ -1.47
SSR1P43307 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 AC087468.1-201ENST00000604365 630 ntBASIC5.86□□□□□ -1.47
SSR1P43307 RN7SL544P-201ENST00000617232 284 ntBASIC5.86□□□□□ -1.47
SSR1P43307 RN7SL763P-201ENST00000620922 284 ntBASIC5.86□□□□□ -1.47
SSR1P43307 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.86□□□□□ -1.47
SSR1P43307 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.86□□□□□ -1.47
SSR1P43307 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SSR1P43307 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 AC008079.2-201ENST00000623543 20396 ntBASIC5.86□□□□□ -1.47
SSR1P43307 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.86□□□□□ -1.47
SSR1P43307 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SSR1P43307 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSR1P43307 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms