Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CKS2P33552 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CKS2P33552 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.82□□□□□ -1.8
CKS2P33552 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CKS2P33552 CDC27P2-201ENST00000425026 1922 ntBASIC3.82□□□□□ -1.8
CKS2P33552 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CKS2P33552 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CKS2P33552 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS2P33552 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 AC006210.2-201ENST00000367074 1545 ntBASIC3.81□□□□□ -1.8
CKS2P33552 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS2P33552 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 AL080312.1-201ENST00000256654 824 ntBASIC3.81□□□□□ -1.8
CKS2P33552 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 RNU1-146P-201ENST00000364015 165 ntBASIC3.81□□□□□ -1.8
CKS2P33552 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 YWHAZP6-201ENST00000399764 738 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AL390316.1-201ENST00000406279 553 ntBASIC3.81□□□□□ -1.8
CKS2P33552 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 RNU2-18P-201ENST00000411224 162 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.81□□□□□ -1.8
CKS2P33552 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 CLCN3P1-201ENST00000423965 1017 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.81□□□□□ -1.8
CKS2P33552 NPM1P33-201ENST00000438918 872 ntBASIC3.81□□□□□ -1.8
CKS2P33552 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS2P33552 UBQLN1P1-207ENST00000441056 1169 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AL672138.1-201ENST00000450604 1015 ntBASIC3.81□□□□□ -1.8
CKS2P33552 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.81□□□□□ -1.8
CKS2P33552 AC009963.3-201ENST00000458090 486 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC079168.1-201ENST00000458741 345 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC090589.1-201ENST00000473109 362 ntBASIC3.81□□□□□ -1.8
CKS2P33552 RN7SL193P-201ENST00000491708 276 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC073073.1-201ENST00000493920 463 ntBASIC3.81□□□□□ -1.8
CKS2P33552 RN7SL362P-201ENST00000494228 267 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 NENFP3-201ENST00000503735 313 ntBASIC3.81□□□□□ -1.8
CKS2P33552 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 AC138517.1-201ENST00000515724 568 ntBASIC3.81□□□□□ -1.8
CKS2P33552 AC027308.1-201ENST00000517993 110 ntBASIC3.81□□□□□ -1.8
CKS2P33552 HMGB1P42-201ENST00000532126 553 ntBASIC3.81□□□□□ -1.8
CKS2P33552 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.81□□□□□ -1.8
CKS2P33552 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.81□□□□□ -1.8
CKS2P33552 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 TEX41-218ENST00000596540 882 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 AC097505.1-201ENST00000610199 565 ntBASIC3.81□□□□□ -1.8
CKS2P33552 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS2P33552 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS2P33552 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS2P33552 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS2P33552 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS2P33552 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 ZNF37CP-201ENST00000406795 241 ntBASIC3.8□□□□□ -1.8
CKS2P33552 RNA5SP487-201ENST00000410186 122 ntBASIC3.8□□□□□ -1.8
CKS2P33552 EIF4A1P1-201ENST00000420241 934 ntBASIC3.8□□□□□ -1.8
CKS2P33552 NPM1P22-201ENST00000427761 952 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS2P33552 AP000547.1-201ENST00000454360 617 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS2P33552 AC091180.1-201ENST00000462104 372 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AC023194.2-201ENST00000465398 406 ntBASIC3.8□□□□□ -1.8
CKS2P33552 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS2P33552 NPM1P29-201ENST00000483112 803 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AC093325.1-201ENST00000508378 326 ntBASIC3.8□□□□□ -1.8
CKS2P33552 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS2P33552 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS2P33552 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS2P33552 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms