Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.46□□□□□ -1.22
CPS1P31327 AL353796.1-201ENST00000561542 3241 ntBASIC7.46□□□□□ -1.22
CPS1P31327 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.46□□□□□ -1.22
CPS1P31327 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 AC104118.1-201ENST00000607625 1589 ntBASIC7.45□□□□□ -1.22
CPS1P31327 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 AL158152.1-201ENST00000602652 1435 ntBASIC7.45□□□□□ -1.22
CPS1P31327 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 RN7SKP263-201ENST00000411194 309 ntBASIC7.45□□□□□ -1.22
CPS1P31327 ELOCP19-201ENST00000411919 318 ntBASIC7.45□□□□□ -1.22
CPS1P31327 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.45□□□□□ -1.22
CPS1P31327 AL389915.1-201ENST00000422463 466 ntBASIC7.45□□□□□ -1.22
CPS1P31327 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 HMGN2P25-201ENST00000486956 268 ntBASIC7.45□□□□□ -1.22
CPS1P31327 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.45□□□□□ -1.22
CPS1P31327 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.45□□□□□ -1.22
CPS1P31327 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CPS1P31327 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.45□□□□□ -1.22
CPS1P31327 MLECP1-201ENST00000615893 709 ntBASIC7.45□□□□□ -1.22
CPS1P31327 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.45□□□□□ -1.22
CPS1P31327 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CPS1P31327 AC016745.2-201ENST00000608834 3443 ntBASIC7.45□□□□□ -1.22
CPS1P31327 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.45□□□□□ -1.22
CPS1P31327 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 BX284613.1-201ENST00000452221 1641 ntBASIC7.45□□□□□ -1.22
CPS1P31327 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CPS1P31327 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CPS1P31327 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CPS1P31327 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC7.44□□□□□ -1.22
CPS1P31327 AC016251.2-201ENST00000623393 3089 ntBASIC7.44□□□□□ -1.22
CPS1P31327 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.44□□□□□ -1.22
CPS1P31327 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CPS1P31327 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.44□□□□□ -1.22
CPS1P31327 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.44□□□□□ -1.22
CPS1P31327 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.44□□□□□ -1.22
CPS1P31327 GAPDHP56-201ENST00000506031 988 ntBASIC7.44□□□□□ -1.22
CPS1P31327 COX6B1P5-201ENST00000509843 249 ntBASIC7.44□□□□□ -1.22
CPS1P31327 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.44□□□□□ -1.22
CPS1P31327 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.44□□□□□ -1.22
CPS1P31327 AL109766.1-201ENST00000555080 552 ntBASIC7.44□□□□□ -1.22
CPS1P31327 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.44□□□□□ -1.22
CPS1P31327 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.44□□□□□ -1.22
CPS1P31327 AC008814.1-201ENST00000603797 406 ntBASIC7.44□□□□□ -1.22
CPS1P31327 AC114774.1-201ENST00000507410 1770 ntBASIC7.44□□□□□ -1.22
CPS1P31327 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.44□□□□□ -1.22
CPS1P31327 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CPS1P31327 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.44□□□□□ -1.22
CPS1P31327 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CPS1P31327 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CPS1P31327 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.44□□□□□ -1.22
CPS1P31327 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
CPS1P31327 AC010329.1-201ENST00000593903 8328 ntBASIC7.43□□□□□ -1.22
CPS1P31327 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CPS1P31327 MIR134-201ENST00000385258 73 ntBASIC7.43□□□□□ -1.22
CPS1P31327 RNU4-25P-201ENST00000410569 230 ntBASIC7.43□□□□□ -1.22
CPS1P31327 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.43□□□□□ -1.22
CPS1P31327 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
CPS1P31327 RPS4XP16-201ENST00000427198 791 ntBASIC7.43□□□□□ -1.22
CPS1P31327 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.43□□□□□ -1.22
CPS1P31327 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.43□□□□□ -1.22
CPS1P31327 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.43□□□□□ -1.22
CPS1P31327 RN7SL188P-201ENST00000469842 285 ntBASIC7.43□□□□□ -1.22
CPS1P31327 NPM1P42-201ENST00000560329 862 ntBASIC7.43□□□□□ -1.22
CPS1P31327 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 AC011944.2-201ENST00000624440 683 ntBASIC7.43□□□□□ -1.22
CPS1P31327 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.43□□□□□ -1.22
CPS1P31327 KARSP3-201ENST00000571212 1504 ntBASIC7.43□□□□□ -1.22
CPS1P31327 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.43□□□□□ -1.22
CPS1P31327 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
CPS1P31327 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.43□□□□□ -1.22
CPS1P31327 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
CPS1P31327 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.43□□□□□ -1.22
CPS1P31327 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.43□□□□□ -1.22
CPS1P31327 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
CPS1P31327 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CPS1P31327 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CPS1P31327 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CPS1P31327 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CPS1P31327 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.42□□□□□ -1.22
CPS1P31327 OR52J1P-201ENST00000450596 932 ntBASIC7.42□□□□□ -1.22
CPS1P31327 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms