Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 U3.22-201ENST00000391120 215 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 RPS26P38-201ENST00000414476 348 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 AF186996.5-201ENST00000418098 904 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 GTF2IP2-201ENST00000424290 697 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 AC004975.1-201ENST00000428733 208 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 MTCYBP21-201ENST00000443300 1113 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 MIR4284-201ENST00000578924 81 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 AL158152.1-201ENST00000602652 1435 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.16□□□□□ -1.42
COL4A5P29400 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A5P29400 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A5P29400 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
COL4A5P29400 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 U3.28-201ENST00000391249 210 ntBASIC6.15□□□□□ -1.42
COL4A5P29400 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A5P29400 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A5P29400 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A5P29400 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A5P29400 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.15□□□□□ -1.42
COL4A5P29400 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.15□□□□□ -1.42
COL4A5P29400 AURKAPS2-201ENST00000454983 333 ntBASIC6.15□□□□□ -1.42
COL4A5P29400 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.15□□□□□ -1.42
COL4A5P29400 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A5P29400 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.15□□□□□ -1.42
COL4A5P29400 MIR4277-201ENST00000578298 84 ntBASIC6.15□□□□□ -1.42
COL4A5P29400 AC011626.1-201ENST00000604710 562 ntBASIC6.15□□□□□ -1.42
COL4A5P29400 AC010857.1-201ENST00000606398 594 ntBASIC6.15□□□□□ -1.42
COL4A5P29400 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A5P29400 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.15□□□□□ -1.43
COL4A5P29400 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 LCOR-201ENST00000286067 4542 ntBASIC6.15□□□□□ -1.43
COL4A5P29400 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.15□□□□□ -1.43
COL4A5P29400 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.15□□□□□ -1.43
COL4A5P29400 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
COL4A5P29400 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.15□□□□□ -1.43
COL4A5P29400 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 ZNF652P1-201ENST00000442420 1309 ntBASIC6.15□□□□□ -1.43
COL4A5P29400 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A5P29400 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A5P29400 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 DHX40P1-201ENST00000588725 1412 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 AL590240.1-201ENST00000334118 313 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 ELOCP19-201ENST00000411919 318 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A5P29400 AC234779.1-201ENST00000425910 285 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.14□□□□□ -1.43
COL4A5P29400 CEACAMP6-201ENST00000452007 574 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 snoU13.1-201ENST00000459157 104 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 OR11I1P-201ENST00000486033 954 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A5P29400 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.14□□□□□ -1.43
COL4A5P29400 NMNAT1P1-201ENST00000554095 876 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 EIF1P5-201ENST00000585002 234 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 AL121873.1-201ENST00000616013 524 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A5P29400 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL4A5P29400 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A5P29400 AC068769.1-201ENST00000474767 2426 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A5P29400 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL4A5P29400 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
COL4A5P29400 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL4A5P29400 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A5P29400 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A5P29400 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 OR2B7P-201ENST00000429302 934 ntBASIC6.14□□□□□ -1.43
COL4A5P29400 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms