Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC037479.1-201ENST00000558361 625 ntBASIC5.77□□□□□ -1.49
CD40P25942 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.77□□□□□ -1.49
CD40P25942 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.77□□□□□ -1.49
CD40P25942 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.77□□□□□ -1.49
CD40P25942 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.77□□□□□ -1.49
CD40P25942 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.77□□□□□ -1.49
CD40P25942 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.77□□□□□ -1.49
CD40P25942 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CD40P25942 AC093278.2-201ENST00000564956 2485 ntBASIC5.77□□□□□ -1.49
CD40P25942 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CD40P25942 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.77□□□□□ -1.49
CD40P25942 AL133243.4-201ENST00000623116 3109 ntBASIC5.77□□□□□ -1.49
CD40P25942 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.77□□□□□ -1.49
CD40P25942 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD40P25942 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD40P25942 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CD40P25942 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD40P25942 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CD40P25942 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.77□□□□□ -1.49
CD40P25942 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.77□□□□□ -1.49
CD40P25942 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD40P25942 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CD40P25942 MSL3P1-202ENST00000440028 1468 ntBASIC5.77□□□□□ -1.49
CD40P25942 DDX18P4-201ENST00000511690 1966 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC137056.2-201ENST00000624055 1958 ntBASIC5.76□□□□□ -1.49
CD40P25942 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CD40P25942 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CD40P25942 AL390237.1-201ENST00000404226 1415 ntBASIC5.76□□□□□ -1.49
CD40P25942 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CD40P25942 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CD40P25942 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CD40P25942 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.76□□□□□ -1.49
CD40P25942 Y_RNA.194-201ENST00000363985 102 ntBASIC5.76□□□□□ -1.49
CD40P25942 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 OR52E6-202ENST00000379946 954 ntBASIC5.76□□□□□ -1.49
CD40P25942 U3.52-201ENST00000384034 216 ntBASIC5.76□□□□□ -1.49
CD40P25942 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CD40P25942 AC099535.1-201ENST00000408928 371 ntBASIC5.76□□□□□ -1.49
CD40P25942 RN7SKP221-201ENST00000410420 301 ntBASIC5.76□□□□□ -1.49
CD40P25942 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.76□□□□□ -1.49
CD40P25942 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 AL929472.1-201ENST00000417484 429 ntBASIC5.76□□□□□ -1.49
CD40P25942 NPM1P22-201ENST00000427761 952 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC245452.2-201ENST00000435222 392 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 AL138878.2-201ENST00000440581 1241 ntBASIC5.76□□□□□ -1.49
CD40P25942 RPS7P5-201ENST00000441482 581 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 GAPDHP33-201ENST00000443168 1013 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 MTND2P19-201ENST00000449129 1012 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL390728.3-201ENST00000452704 270 ntBASIC5.76□□□□□ -1.49
CD40P25942 MTCO2P18-201ENST00000457151 658 ntBASIC5.76□□□□□ -1.49
CD40P25942 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 RPL29P23-201ENST00000486188 442 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL117692.1-201ENST00000494283 713 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC093870.1-201ENST00000506837 213 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC095057.1-201ENST00000507583 168 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC005178.1-201ENST00000508392 440 ntBASIC5.76□□□□□ -1.49
CD40P25942 HMGB3P13-201ENST00000511263 607 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 CYP4F27P-201ENST00000514557 494 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 AP003033.2-201ENST00000528901 805 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.76□□□□□ -1.49
CD40P25942 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.76□□□□□ -1.49
CD40P25942 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 AC245052.7-201ENST00000601161 359 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC011500.1-201ENST00000601963 469 ntBASIC5.76□□□□□ -1.49
CD40P25942 AP003973.1-201ENST00000604639 691 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC100767.2-201ENST00000604840 693 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL592221.1-201ENST00000605266 382 ntBASIC5.76□□□□□ -1.49
CD40P25942 SNORD96A-201ENST00000606577 79 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC009779.8-202ENST00000607990 932 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms