Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.4□□□□□ -1.39
POLR2AP24928 AL031320.1-201ENST00000604177 357 ntBASIC6.4□□□□□ -1.39
POLR2AP24928 AL133481.2-203ENST00000607558 139 ntBASIC6.4□□□□□ -1.39
POLR2AP24928 AC068831.8-201ENST00000620171 435 ntBASIC6.4□□□□□ -1.39
POLR2AP24928 AC112694.2-201ENST00000623697 768 ntBASIC6.4□□□□□ -1.39
POLR2AP24928 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
POLR2AP24928 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
POLR2AP24928 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
POLR2AP24928 NXF4-202ENST00000416098 1465 ntBASIC6.4□□□□□ -1.39
POLR2AP24928 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC092747.4-201ENST00000620519 1861 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 AL078595.1-201ENST00000404458 226 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.39□□□□□ -1.39
POLR2AP24928 AK3P5-201ENST00000432033 519 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.39□□□□□ -1.39
POLR2AP24928 FCF1P7-201ENST00000451185 558 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 RN7SL385P-201ENST00000468873 276 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC021146.5-201ENST00000503544 545 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 PRELID3BP5-201ENST00000508612 460 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 BTF3P13-201ENST00000513224 490 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AC087360.1-201ENST00000518788 616 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.39□□□□□ -1.39
POLR2AP24928 MIR4691-201ENST00000583764 85 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC025165.5-201ENST00000602802 578 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AC009597.2-201ENST00000604659 592 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AL162431.4-201ENST00000604674 411 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AP000346.3-201ENST00000622821 210 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
POLR2AP24928 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
POLR2AP24928 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
POLR2AP24928 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 AC010329.1-201ENST00000593903 8328 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 AC022034.1-201ENST00000512867 2156 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
POLR2AP24928 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.39□□□□□ -1.39
POLR2AP24928 AL078621.3-201ENST00000623707 2042 ntBASIC6.39□□□□□ -1.39
POLR2AP24928 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
POLR2AP24928 CHMP1B2P-201ENST00000399581 597 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.38□□□□□ -1.39
POLR2AP24928 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC093655.2-201ENST00000425735 631 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC114878.1-201ENST00000441166 358 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 Z83846.1-201ENST00000446798 265 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC073264.2-201ENST00000448886 166 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 OSTCP1-201ENST00000455507 450 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC058823.1-201ENST00000485315 474 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 SCARNA16.4-201ENST00000516956 187 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.38□□□□□ -1.39
POLR2AP24928 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 AC005000.1-201ENST00000536192 288 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC093510.2-201ENST00000562820 896 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC009303.3-201ENST00000591103 736 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.38□□□□□ -1.39
POLR2AP24928 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC023762.1-201ENST00000603280 584 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 AL022323.4-201ENST00000623980 13120 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC120036.2-201ENST00000509729 1474 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 HSPD1P7-201ENST00000447985 1686 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC013268.3-201ENST00000262716 2324 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 AL356317.1-201ENST00000396110 1436 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 AL359922.2-201ENST00000581788 3017 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AC018809.2-201ENST00000602436 3823 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 MTND4P13-201ENST00000402078 1023 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms