Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 MT-RNR2-201ENST00000387347 1559 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.42□□□□□ -1.54
XRCC1P18887 AC079097.1-201ENST00000512187 1399 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 TCP11X1-202ENST00000622971 1372 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC003985.2-201ENST00000562268 1669 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
XRCC1P18887 Z83820.1-201ENST00000456978 1499 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
XRCC1P18887 RNA5SP234-201ENST00000363916 119 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 GABARAPL3-201ENST00000412799 354 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 AC007161.1-204ENST00000423039 460 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.41□□□□□ -1.54
XRCC1P18887 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC074386.1-201ENST00000476560 767 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 RNU6-1334P-201ENST00000516032 105 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC122688.1-201ENST00000541494 223 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 MIR6837-201ENST00000620884 64 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.41□□□□□ -1.54
XRCC1P18887 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
XRCC1P18887 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 MIPEPP2-201ENST00000422560 1819 ntBASIC5.41□□□□□ -1.54
XRCC1P18887 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
XRCC1P18887 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
XRCC1P18887 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
XRCC1P18887 ADAM5-202ENST00000399789 1942 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.4□□□□□ -1.54
XRCC1P18887 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
XRCC1P18887 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
XRCC1P18887 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 AC092681.1-201ENST00000297369 291 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
XRCC1P18887 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
XRCC1P18887 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.4□□□□□ -1.54
XRCC1P18887 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 AL050305.1-201ENST00000399993 1230 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 Z68694.1-201ENST00000413929 841 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 CFL1P1-202ENST00000432948 411 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.4□□□□□ -1.54
XRCC1P18887 RPL7P45-201ENST00000455851 743 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 RNU7-157P-201ENST00000459600 66 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 RN7SL629P-201ENST00000489622 285 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.4□□□□□ -1.54
XRCC1P18887 AC021193.1-201ENST00000511607 420 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 RN7SKP253-201ENST00000516424 309 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
XRCC1P18887 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.4□□□□□ -1.54
XRCC1P18887 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.4□□□□□ -1.54
XRCC1P18887 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.4□□□□□ -1.54
XRCC1P18887 SUMO2P15-201ENST00000604285 278 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 AC005840.5-201ENST00000619166 599 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.4□□□□□ -1.54
XRCC1P18887 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.4□□□□□ -1.54
XRCC1P18887 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.4□□□□□ -1.54
XRCC1P18887 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.4□□□□□ -1.54
XRCC1P18887 SAMMSON-209ENST00000641222 1100 ntBASIC5.4□□□□□ -1.54
XRCC1P18887 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
XRCC1P18887 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
XRCC1P18887 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.55
XRCC1P18887 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
XRCC1P18887 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.4□□□□□ -1.55
XRCC1P18887 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
XRCC1P18887 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms