Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.66□□□□□ -1.5
ERCC2P18074 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ERCC2P18074 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ERCC2P18074 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC2P18074 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC2P18074 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC2P18074 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC2P18074 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.65□□□□□ -1.5
ERCC2P18074 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ERCC2P18074 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ERCC2P18074 SNORA17A-201ENST00000391185 133 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 GABARAPL3-201ENST00000412799 354 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 AL359265.1-201ENST00000440296 795 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 AL390119.1-201ENST00000440329 312 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 TXNP2-201ENST00000443918 295 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 AC009963.4-201ENST00000448535 339 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 RNU6-362P-201ENST00000516736 90 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC2P18074 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC2P18074 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC2P18074 AC027544.3-201ENST00000535082 757 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ERCC2P18074 AC022404.1-201ENST00000555320 273 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 AC020978.7-201ENST00000575953 1187 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC2P18074 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC2P18074 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 SNORA17.5-201ENST00000630429 132 ntBASIC5.65□□□□□ -1.5
ERCC2P18074 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ERCC2P18074 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.51
ERCC2P18074 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 SAMM50P1-201ENST00000455403 1399 ntBASIC5.65□□□□□ -1.51
ERCC2P18074 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC2P18074 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
ERCC2P18074 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC2P18074 ABCC13-202ENST00000463099 3842 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC2P18074 AL360270.2-201ENST00000562952 5985 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC2P18074 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC2P18074 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 SNORD56.6-201ENST00000384569 71 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 MTCO1P45-201ENST00000431457 267 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC2P18074 RPL12P11-201ENST00000439970 501 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC2P18074 RBMY2TP-201ENST00000451162 947 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC2P18074 CR383656.1-201ENST00000484916 377 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC2P18074 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC2P18074 AP000619.2-201ENST00000546014 969 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
ERCC2P18074 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 AC083837.1-201ENST00000565297 2994 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 AC015720.2-201ENST00000567709 334 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC2P18074 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC104695.2-201ENST00000605056 775 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC007786.3-201ENST00000615154 596 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC107308.1-201ENST00000615897 301 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AL691477.1-201ENST00000624398 162 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC021766.1-201ENST00000624404 741 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AL139254.3-201ENST00000641097 674 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC073869.8-201ENST00000641806 335 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 KARSP1-201ENST00000451871 1752 ntBASIC5.64□□□□□ -1.51
ERCC2P18074 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC2P18074 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC2P18074 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC2P18074 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ERCC2P18074 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ERCC2P18074 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC2P18074 RN7SKP145-201ENST00000363291 303 ntBASIC5.63□□□□□ -1.51
ERCC2P18074 SNORA70.6-201ENST00000383934 134 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms