Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 AL662874.1-201ENST00000426065 230 ntBASIC5.43□□□□□ -1.54
CDH1P12830 RPS29P14-201ENST00000431518 171 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 AC006335.2-201ENST00000437993 330 ntBASIC5.43□□□□□ -1.54
CDH1P12830 SUMO2P3-201ENST00000438311 288 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH1P12830 RPL36AP39-201ENST00000445859 318 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 CBX1P2-201ENST00000453841 458 ntBASIC5.43□□□□□ -1.54
CDH1P12830 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH1P12830 RPS17P5-201ENST00000498293 408 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AC109481.1-201ENST00000509173 282 ntBASIC5.43□□□□□ -1.54
CDH1P12830 SNORA43.3-201ENST00000517240 103 ntBASIC5.43□□□□□ -1.54
CDH1P12830 CYCSP22-201ENST00000517555 339 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH1P12830 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH1P12830 OR4A17P-201ENST00000526032 904 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
CDH1P12830 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH1P12830 MIR4660-201ENST00000583549 74 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH1P12830 AC008521.2-201ENST00000591021 259 ntBASIC5.43□□□□□ -1.54
CDH1P12830 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH1P12830 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH1P12830 AL512506.1-201ENST00000613918 449 ntBASIC5.43□□□□□ -1.54
CDH1P12830 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH1P12830 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 OR13C1P-202ENST00000641378 2919 ntBASIC5.43□□□□□ -1.54
CDH1P12830 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 AC083899.1-201ENST00000454465 3819 ntBASIC5.43□□□□□ -1.54
CDH1P12830 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH1P12830 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CDH1P12830 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH1P12830 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CDH1P12830 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 GAPDHP24-201ENST00000328713 983 ntBASIC5.42□□□□□ -1.54
CDH1P12830 OR56A4-201ENST00000330728 1209 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH1P12830 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH1P12830 RNU6-1176P-201ENST00000390955 107 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AL512504.1-201ENST00000415494 778 ntBASIC5.42□□□□□ -1.54
CDH1P12830 MTND6P12-201ENST00000428247 522 ntBASIC5.42□□□□□ -1.54
CDH1P12830 RPL23AP19-201ENST00000436229 369 ntBASIC5.42□□□□□ -1.54
CDH1P12830 LINC02210-201ENST00000444561 288 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AC005297.1-201ENST00000444765 862 ntBASIC5.42□□□□□ -1.54
CDH1P12830 EEF1B2P6-201ENST00000445713 673 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH1P12830 LRRC37A14P-201ENST00000452297 462 ntBASIC5.42□□□□□ -1.54
CDH1P12830 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH1P12830 AP000547.1-201ENST00000454360 617 ntBASIC5.42□□□□□ -1.54
CDH1P12830 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.42□□□□□ -1.54
CDH1P12830 RPL31P53-201ENST00000457065 348 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH1P12830 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH1P12830 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH1P12830 AC008628.1-201ENST00000508663 265 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH1P12830 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH1P12830 TRIM51DP-201ENST00000529746 596 ntBASIC5.42□□□□□ -1.54
CDH1P12830 OR4R2P-201ENST00000530815 597 ntBASIC5.42□□□□□ -1.54
CDH1P12830 IGBP1P1-201ENST00000554337 1009 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH1P12830 MIR4311-201ENST00000580794 100 ntBASIC5.42□□□□□ -1.54
CDH1P12830 BNIP3P39-201ENST00000601077 554 ntBASIC5.42□□□□□ -1.54
CDH1P12830 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH1P12830 AC096586.2-201ENST00000610260 441 ntBASIC5.42□□□□□ -1.54
CDH1P12830 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH1P12830 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH1P12830 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH1P12830 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 AL022311.1-201ENST00000623726 19416 ntBASIC5.42□□□□□ -1.54
CDH1P12830 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH1P12830 AL360270.2-201ENST00000562952 5985 ntBASIC5.42□□□□□ -1.54
CDH1P12830 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH1P12830 AC083899.2-201ENST00000423285 1376 ntBASIC5.42□□□□□ -1.54
CDH1P12830 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH1P12830 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms