Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COL5A2P05997 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 HMGB3P7-201ENST00000400214 611 ntBASIC6.84□□□□□ -1.31
COL5A2P05997 OR5M12P-201ENST00000423388 929 ntBASIC6.84□□□□□ -1.31
COL5A2P05997 AC092651.1-201ENST00000426110 312 ntBASIC6.84□□□□□ -1.31
COL5A2P05997 AL137845.2-201ENST00000444292 988 ntBASIC6.84□□□□□ -1.31
COL5A2P05997 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.84□□□□□ -1.31
COL5A2P05997 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.84□□□□□ -1.31
COL5A2P05997 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.84□□□□□ -1.31
COL5A2P05997 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL5A2P05997 AC016717.3-201ENST00000624730 554 ntBASIC6.84□□□□□ -1.31
COL5A2P05997 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.84□□□□□ -1.31
COL5A2P05997 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL5A2P05997 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL5A2P05997 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.84□□□□□ -1.32
COL5A2P05997 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL5A2P05997 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL5A2P05997 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL5A2P05997 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.83□□□□□ -1.32
COL5A2P05997 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 AC010329.1-201ENST00000593903 8328 ntBASIC6.83□□□□□ -1.32
COL5A2P05997 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.83□□□□□ -1.32
COL5A2P05997 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COL5A2P05997 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 Z98755.1-201ENST00000407015 1384 ntBASIC6.83□□□□□ -1.32
COL5A2P05997 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL5A2P05997 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.83□□□□□ -1.32
COL5A2P05997 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.83□□□□□ -1.32
COL5A2P05997 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.83□□□□□ -1.32
COL5A2P05997 AL356981.1-201ENST00000454879 684 ntBASIC6.83□□□□□ -1.32
COL5A2P05997 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.83□□□□□ -1.32
COL5A2P05997 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.83□□□□□ -1.32
COL5A2P05997 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.83□□□□□ -1.32
COL5A2P05997 OR4A17P-201ENST00000526032 904 ntBASIC6.83□□□□□ -1.32
COL5A2P05997 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
COL5A2P05997 AC233699.1-201ENST00000569955 1168 ntBASIC6.83□□□□□ -1.32
COL5A2P05997 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.83□□□□□ -1.32
COL5A2P05997 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 AC015799.1-201ENST00000622996 3122 ntBASIC6.83□□□□□ -1.32
COL5A2P05997 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
COL5A2P05997 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL5A2P05997 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.83□□□□□ -1.32
COL5A2P05997 AC009779.8-201ENST00000641684 4384 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.82□□□□□ -1.32
COL5A2P05997 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 RNU1-74P-201ENST00000384108 171 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC124944.2-201ENST00000429866 1242 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC068287.1-201ENST00000430283 295 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC073465.2-201ENST00000440938 498 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC012512.1-201ENST00000446594 718 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC020898.1-201ENST00000474167 787 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC011005.3-201ENST00000491624 395 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 FTH1P8-201ENST00000498161 514 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC093720.1-201ENST00000505681 714 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC097173.1-201ENST00000505862 819 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.82□□□□□ -1.32
COL5A2P05997 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.82□□□□□ -1.32
COL5A2P05997 AC087360.1-201ENST00000518788 616 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.82□□□□□ -1.32
COL5A2P05997 AC244517.3-201ENST00000616254 1235 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC099654.6-201ENST00000636487 512 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.82□□□□□ -1.32
COL5A2P05997 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL5A2P05997 AC104964.3-201ENST00000606115 2860 ntBASIC6.82□□□□□ -1.32
COL5A2P05997 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.82□□□□□ -1.32
COL5A2P05997 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL5A2P05997 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL5A2P05997 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL5A2P05997 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL5A2P05997 AC079097.1-201ENST00000512187 1399 ntBASIC6.81□□□□□ -1.32
COL5A2P05997 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL5A2P05997 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.81□□□□□ -1.32
COL5A2P05997 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.81□□□□□ -1.32
COL5A2P05997 AC104162.1-201ENST00000430831 2382 ntBASIC6.81□□□□□ -1.32
COL5A2P05997 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL5A2P05997 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.81□□□□□ -1.32
COL5A2P05997 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.81□□□□□ -1.32
COL5A2P05997 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.81□□□□□ -1.32
COL5A2P05997 REG1CP-206ENST00000447469 496 ntBASIC6.81□□□□□ -1.32
COL5A2P05997 NOP56P2-201ENST00000447491 769 ntBASIC6.81□□□□□ -1.32
COL5A2P05997 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms