Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PHBP16-201ENST00000446318 950 ntBASIC3.15□□□□□ -1.91
APOBP04114 RPL7P40-201ENST00000481703 745 ntBASIC3.15□□□□□ -1.91
APOBP04114 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBP04114 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBP04114 BNIP3P11-201ENST00000603878 563 ntBASIC3.15□□□□□ -1.91
APOBP04114 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.15□□□□□ -1.91
APOBP04114 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 NDUFB4P8-201ENST00000435351 367 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC108463.1-201ENST00000450258 347 ntBASIC3.14□□□□□ -1.91
APOBP04114 AL691482.1-201ENST00000453255 87 ntBASIC3.14□□□□□ -1.91
APOBP04114 SNORD125-201ENST00000459538 96 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC026726.1-201ENST00000512859 601 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC130364.2-201ENST00000528639 604 ntBASIC3.14□□□□□ -1.91
APOBP04114 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AC034229.2-201ENST00000566945 2508 ntBASIC3.14□□□□□ -1.91
APOBP04114 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
APOBP04114 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 OR4K15-201ENST00000305051 1216 ntBASIC3.14□□□□□ -1.91
APOBP04114 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AC097173.1-201ENST00000505862 819 ntBASIC3.14□□□□□ -1.91
APOBP04114 SEPT10P1-201ENST00000517342 1162 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.14□□□□□ -1.91
APOBP04114 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
APOBP04114 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AC120338.1-201ENST00000625074 1541 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC015799.1-201ENST00000622996 3122 ntBASIC3.14□□□□□ -1.91
APOBP04114 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
APOBP04114 AC017079.1-201ENST00000333650 415 ntBASIC3.14□□□□□ -1.91
APOBP04114 RN7SKP114-201ENST00000410327 279 ntBASIC3.14□□□□□ -1.91
APOBP04114 SNORA59A-201ENST00000459326 152 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.14□□□□□ -1.91
APOBP04114 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 H3F3BP2-201ENST00000583907 357 ntBASIC3.14□□□□□ -1.91
APOBP04114 AP001357.1-201ENST00000586304 1053 ntBASIC3.14□□□□□ -1.91
APOBP04114 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 CASC19-255ENST00000641733 1385 ntBASIC3.14□□□□□ -1.91
APOBP04114 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBP04114 AL445189.1-201ENST00000405722 338 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 HMGB1P4-201ENST00000455362 567 ntBASIC3.14□□□□□ -1.91
APOBP04114 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 RPSAP51-201ENST00000497462 645 ntBASIC3.14□□□□□ -1.91
APOBP04114 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.14□□□□□ -1.91
APOBP04114 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.14□□□□□ -1.91
APOBP04114 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.14□□□□□ -1.91
APOBP04114 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.14□□□□□ -1.91
APOBP04114 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBP04114 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 AC005225.5-201ENST00000623547 2225 ntBASIC3.13□□□□□ -1.91
APOBP04114 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 UGT2B24P-201ENST00000514441 1597 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms