Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPL7P45-201ENST00000455851 743 ntBASIC5.67□□□□□ -1.5
APOEP02649 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
APOEP02649 IGKV2-18-201ENST00000522607 343 ntBASIC5.67□□□□□ -1.5
APOEP02649 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.67□□□□□ -1.5
APOEP02649 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.67□□□□□ -1.5
APOEP02649 AL022394.1-201ENST00000606979 292 ntBASIC5.67□□□□□ -1.5
APOEP02649 AP000864.1-201ENST00000609424 650 ntBASIC5.67□□□□□ -1.5
APOEP02649 AC109309.2-201ENST00000612597 332 ntBASIC5.67□□□□□ -1.5
APOEP02649 AC022467.1-201ENST00000614738 749 ntBASIC5.67□□□□□ -1.5
APOEP02649 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOEP02649 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOEP02649 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
APOEP02649 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOEP02649 PCAT14-202ENST00000627127 3935 ntBASIC5.67□□□□□ -1.5
APOEP02649 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.67□□□□□ -1.5
APOEP02649 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOEP02649 MAPK10-328ENST00000641553 4009 ntBASIC5.67□□□□□ -1.5
APOEP02649 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
APOEP02649 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APOEP02649 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
APOEP02649 AL353796.1-201ENST00000561542 3241 ntBASIC5.67□□□□□ -1.5
APOEP02649 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
APOEP02649 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.66□□□□□ -1.5
APOEP02649 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.66□□□□□ -1.5
APOEP02649 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
APOEP02649 AL391361.1-201ENST00000405580 489 ntBASIC5.66□□□□□ -1.5
APOEP02649 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.66□□□□□ -1.5
APOEP02649 CYCSP6-201ENST00000434498 302 ntBASIC5.66□□□□□ -1.5
APOEP02649 GSTM5P1-201ENST00000434751 660 ntBASIC5.66□□□□□ -1.5
APOEP02649 CYCSP12-201ENST00000437729 300 ntBASIC5.66□□□□□ -1.5
APOEP02649 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.66□□□□□ -1.5
APOEP02649 AC073465.2-201ENST00000440938 498 ntBASIC5.66□□□□□ -1.5
APOEP02649 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.66□□□□□ -1.5
APOEP02649 OR2AO1P-201ENST00000476497 403 ntBASIC5.66□□□□□ -1.5
APOEP02649 HMGB1P44-201ENST00000508597 572 ntBASIC5.66□□□□□ -1.5
APOEP02649 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.66□□□□□ -1.5
APOEP02649 AC109464.1-201ENST00000511091 819 ntBASIC5.66□□□□□ -1.5
APOEP02649 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.66□□□□□ -1.5
APOEP02649 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.66□□□□□ -1.5
APOEP02649 AC079064.1-201ENST00000528365 362 ntBASIC5.66□□□□□ -1.5
APOEP02649 AC068993.1-201ENST00000546724 589 ntBASIC5.66□□□□□ -1.5
APOEP02649 BLZF2P-201ENST00000553776 1130 ntBASIC5.66□□□□□ -1.5
APOEP02649 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
APOEP02649 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.66□□□□□ -1.5
APOEP02649 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 AC060766.1-201ENST00000590824 627 ntBASIC5.66□□□□□ -1.5
APOEP02649 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.66□□□□□ -1.5
APOEP02649 MIR6886-201ENST00000619864 61 ntBASIC5.66□□□□□ -1.5
APOEP02649 MIR6837-201ENST00000620884 64 ntBASIC5.66□□□□□ -1.5
APOEP02649 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
APOEP02649 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
APOEP02649 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
APOEP02649 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOEP02649 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
APOEP02649 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.65□□□□□ -1.5
APOEP02649 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOEP02649 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOEP02649 AL359715.3-201ENST00000569267 2123 ntBASIC5.65□□□□□ -1.5
APOEP02649 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.65□□□□□ -1.5
APOEP02649 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
APOEP02649 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
APOEP02649 RN7SKP162-201ENST00000363605 345 ntBASIC5.65□□□□□ -1.5
APOEP02649 RNA5SP335-201ENST00000363817 110 ntBASIC5.65□□□□□ -1.5
APOEP02649 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
APOEP02649 RNU1-77P-201ENST00000390868 162 ntBASIC5.65□□□□□ -1.5
APOEP02649 RN7SKP229-201ENST00000410465 302 ntBASIC5.65□□□□□ -1.5
APOEP02649 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 AC079809.1-201ENST00000415468 276 ntBASIC5.65□□□□□ -1.5
APOEP02649 AL133325.1-201ENST00000421090 382 ntBASIC5.65□□□□□ -1.5
APOEP02649 SRSF1P1-201ENST00000424058 520 ntBASIC5.65□□□□□ -1.5
APOEP02649 PRUNEP1-201ENST00000425846 705 ntBASIC5.65□□□□□ -1.5
APOEP02649 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.65□□□□□ -1.5
APOEP02649 RPS26P24-201ENST00000497656 331 ntBASIC5.65□□□□□ -1.5
APOEP02649 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.65□□□□□ -1.5
APOEP02649 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
APOEP02649 AC138832.1-201ENST00000522871 556 ntBASIC5.65□□□□□ -1.5
APOEP02649 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.65□□□□□ -1.5
APOEP02649 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
APOEP02649 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.65□□□□□ -1.5
APOEP02649 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
APOEP02649 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.65□□□□□ -1.5
APOEP02649 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 AC005341.1-201ENST00000571086 708 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms