Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFP01375 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 AC004158.1-201ENST00000564508 4319 ntBASIC5.2□□□□□ -1.58
TNFP01375 AC083899.1-201ENST00000454465 3819 ntBASIC5.2□□□□□ -1.58
TNFP01375 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFP01375 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFP01375 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFP01375 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFP01375 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TNFP01375 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFP01375 AC053481.2-202ENST00000582394 1500 ntBASIC5.19□□□□□ -1.58
TNFP01375 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TNFP01375 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFP01375 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 OR8V1P-201ENST00000395193 873 ntBASIC5.19□□□□□ -1.58
TNFP01375 AL645733.1-201ENST00000402250 217 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.19□□□□□ -1.58
TNFP01375 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.19□□□□□ -1.58
TNFP01375 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.19□□□□□ -1.58
TNFP01375 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.19□□□□□ -1.58
TNFP01375 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFP01375 SBDSP1-204ENST00000453858 737 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC079168.1-201ENST00000458741 345 ntBASIC5.19□□□□□ -1.58
TNFP01375 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFP01375 AC134349.2-201ENST00000535136 910 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC092490.3-201ENST00000545370 572 ntBASIC5.19□□□□□ -1.58
TNFP01375 HNRNPCP1-201ENST00000556181 766 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC093524.1-201ENST00000564266 1094 ntBASIC5.19□□□□□ -1.58
TNFP01375 MIR4646-201ENST00000580775 63 ntBASIC5.19□□□□□ -1.58
TNFP01375 AP001357.1-201ENST00000586304 1053 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC011447.4-201ENST00000587562 111 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.19□□□□□ -1.58
TNFP01375 AC005618.4-201ENST00000625053 554 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC135068.12-201ENST00000637370 931 ntBASIC5.19□□□□□ -1.58
TNFP01375 LINC01739-205ENST00000641890 573 ntBASIC5.19□□□□□ -1.58
TNFP01375 AC140479.2-201ENST00000421567 3130 ntBASIC5.19□□□□□ -1.58
TNFP01375 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
TNFP01375 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFP01375 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 AC131971.1-201ENST00000332881 1482 ntBASIC5.19□□□□□ -1.58
TNFP01375 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TNFP01375 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TNFP01375 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFP01375 AC073429.2-201ENST00000569694 1444 ntBASIC5.18□□□□□ -1.58
TNFP01375 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFP01375 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
TNFP01375 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFP01375 RN7SKP125-201ENST00000410481 302 ntBASIC5.18□□□□□ -1.58
TNFP01375 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFP01375 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 NDUFB4P8-201ENST00000435351 367 ntBASIC5.18□□□□□ -1.58
TNFP01375 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFP01375 RPL12P3-201ENST00000440080 396 ntBASIC5.18□□□□□ -1.58
TNFP01375 AC092647.3-201ENST00000443044 633 ntBASIC5.18□□□□□ -1.58
TNFP01375 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFP01375 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TNFP01375 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 CBX1P5-201ENST00000475330 559 ntBASIC5.18□□□□□ -1.58
TNFP01375 AC022133.1-201ENST00000490961 571 ntBASIC5.18□□□□□ -1.58
TNFP01375 OR8Q1P-201ENST00000526467 655 ntBASIC5.18□□□□□ -1.58
TNFP01375 OR4A46P-201ENST00000527255 933 ntBASIC5.18□□□□□ -1.58
TNFP01375 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFP01375 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFP01375 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFP01375 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFP01375 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFP01375 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFP01375 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFP01375 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFP01375 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TNFP01375 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TNFP01375 CASC19-281ENST00000642118 1554 ntBASIC5.17□□□□□ -1.58
TNFP01375 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFP01375 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms