Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.21□□□□□ -1.58
SSX4O60224 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.21□□□□□ -1.58
SSX4O60224 AC108673.3-201ENST00000609183 335 ntBASIC5.21□□□□□ -1.58
SSX4O60224 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX4O60224 AL158062.1-201ENST00000619632 745 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC020978.9-201ENST00000624380 1141 ntBASIC5.21□□□□□ -1.58
SSX4O60224 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.21□□□□□ -1.58
SSX4O60224 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 AP005432.1-201ENST00000580891 3485 ntBASIC5.21□□□□□ -1.58
SSX4O60224 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 CDC27P2-201ENST00000425026 1922 ntBASIC5.21□□□□□ -1.58
SSX4O60224 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX4O60224 HSPA8P14-201ENST00000552265 1805 ntBASIC5.2□□□□□ -1.58
SSX4O60224 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 AL034546.1-201ENST00000623740 3693 ntBASIC5.2□□□□□ -1.58
SSX4O60224 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SSX4O60224 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 RBMY1HP-201ENST00000382759 1389 ntBASIC5.2□□□□□ -1.58
SSX4O60224 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 AC110792.3-201ENST00000595906 1614 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AL512283.1-201ENST00000606756 1384 ntBASIC5.2□□□□□ -1.58
SSX4O60224 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSX4O60224 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 SNORA11B-201ENST00000408175 129 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AC234781.4-201ENST00000419384 244 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 ZNF965P-201ENST00000432501 817 ntBASIC5.2□□□□□ -1.58
SSX4O60224 RPL36AP39-201ENST00000445859 318 ntBASIC5.2□□□□□ -1.58
SSX4O60224 FTLP8-201ENST00000446770 267 ntBASIC5.2□□□□□ -1.58
SSX4O60224 RAB28P2-201ENST00000454299 641 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 PDCL3P4-201ENST00000489621 720 ntBASIC5.2□□□□□ -1.58
SSX4O60224 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 HMGB1P3-201ENST00000502802 616 ntBASIC5.2□□□□□ -1.58
SSX4O60224 MTCO1P31-201ENST00000506355 492 ntBASIC5.2□□□□□ -1.58
SSX4O60224 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 HMGB1P46-201ENST00000520062 610 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AC078899.1-201ENST00000521432 1185 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX4O60224 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX4O60224 WBP1LP3-201ENST00000523033 208 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX4O60224 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX4O60224 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX4O60224 DUX4L52-201ENST00000549363 777 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX4O60224 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX4O60224 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 AL450270.1-201ENST00000606160 391 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AL022394.1-201ENST00000606979 292 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AL591167.1-201ENST00000607321 456 ntBASIC5.2□□□□□ -1.58
SSX4O60224 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.2□□□□□ -1.58
SSX4O60224 AC126175.1-201ENST00000617041 758 ntBASIC5.2□□□□□ -1.58
SSX4O60224 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.2□□□□□ -1.58
SSX4O60224 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SSX4O60224 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX4O60224 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SSX4O60224 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX4O60224 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
SSX4O60224 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.2□□□□□ -1.58
SSX4O60224 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 AC239868.2-201ENST00000564237 4527 ntBASIC5.19□□□□□ -1.58
SSX4O60224 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX4O60224 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX4O60224 SNORA43.1-201ENST00000364863 140 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms