Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 ACA64.1-201ENST00000459171 127 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.14□□□□□ -1.27
SOX1O00570 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 Y_RNA.667-201ENST00000516212 107 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AL162632.2-201ENST00000553933 399 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 MTCO1P40-201ENST00000574371 625 ntBASIC7.14□□□□□ -1.27
SOX1O00570 SNORA59B-202ENST00000578183 701 ntBASIC7.14□□□□□ -1.27
SOX1O00570 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 BNIP3P33-201ENST00000598912 569 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AL137072.1-201ENST00000603444 466 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AP003117.2-201ENST00000606010 545 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.14□□□□□ -1.27
SOX1O00570 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 FAM27E2-201ENST00000619668 403 ntBASIC7.14□□□□□ -1.27
SOX1O00570 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 AC016717.3-201ENST00000624730 554 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AC119674.1-213ENST00000641177 1386 ntBASIC7.14□□□□□ -1.27
SOX1O00570 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SOX1O00570 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 AL157831.2-201ENST00000564681 3095 ntBASIC7.13□□□□□ -1.27
SOX1O00570 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SOX1O00570 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 AC022150.4-201ENST00000598322 2848 ntBASIC7.13□□□□□ -1.27
SOX1O00570 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 AC010132.2-201ENST00000295493 1043 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AL121657.1-201ENST00000327215 531 ntBASIC7.13□□□□□ -1.27
SOX1O00570 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 RNU6-1017P-201ENST00000363613 106 ntBASIC7.13□□□□□ -1.27
SOX1O00570 RNA5SP27-201ENST00000363839 119 ntBASIC7.13□□□□□ -1.27
SOX1O00570 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SOX1O00570 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 SNORA70-201ENST00000384436 135 ntBASIC7.13□□□□□ -1.27
SOX1O00570 TAF9BP1-201ENST00000396646 746 ntBASIC7.13□□□□□ -1.27
SOX1O00570 MTCO3P31-201ENST00000405526 789 ntBASIC7.13□□□□□ -1.27
SOX1O00570 RN7SKP232-201ENST00000410170 290 ntBASIC7.13□□□□□ -1.27
SOX1O00570 U3.43-201ENST00000410734 213 ntBASIC7.13□□□□□ -1.27
SOX1O00570 TPMTP3-201ENST00000411928 735 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 RPS15AP38-201ENST00000413110 372 ntBASIC7.13□□□□□ -1.27
SOX1O00570 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 AC245052.5-201ENST00000416320 649 ntBASIC7.13□□□□□ -1.27
SOX1O00570 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 AL035458.1-201ENST00000433096 585 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC094019.1-201ENST00000434678 472 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC091862.1-201ENST00000438016 1100 ntBASIC7.13□□□□□ -1.27
SOX1O00570 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 AL645936.1-201ENST00000441979 518 ntBASIC7.13□□□□□ -1.27
SOX1O00570 HMGB1P5-202ENST00000451497 985 ntBASIC7.13□□□□□ -1.27
SOX1O00570 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 YWHAEP1-201ENST00000453697 763 ntBASIC7.13□□□□□ -1.27
SOX1O00570 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 RPS20P4-201ENST00000461659 355 ntBASIC7.13□□□□□ -1.27
SOX1O00570 RN7SL180P-201ENST00000466769 294 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC004924.1-201ENST00000480160 781 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms