Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 LSM3P4-201ENST00000502948 309 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC188H7C350 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 MRPS16P1-201ENST00000523462 412 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 HMGB1P42-201ENST00000532126 553 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC114947.2-201ENST00000565748 2125 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC011500.1-201ENST00000601963 469 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AP005431.1-201ENST00000618479 319 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 AL031595.2-201ENST00000624215 19071 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AP005432.1-201ENST00000580891 3485 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC112198.2-201ENST00000426589 6996 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 COX6B1P3-201ENST00000312310 260 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RNA5SP273-201ENST00000362484 113 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RN7SKP153-201ENST00000365026 316 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 OR7E101P-201ENST00000400428 513 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 CTSL3P-202ENST00000412179 788 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 NDUFA5P8-201ENST00000449019 346 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RPL31P20-201ENST00000449593 360 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC188H7C350 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC188H7C350 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC026782.2-201ENST00000510845 636 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AC117525.1-201ENST00000515228 503 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC188H7C350 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 OR7E10P-201ENST00000526420 991 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 OR8A2P-201ENST00000528631 952 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC188H7C350 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC188H7C350 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC188H7C350 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC022884.2-201ENST00000578535 580 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AP005403.1-201ENST00000579720 229 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AL133406.3-201ENST00000606817 541 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AC100814.1-201ENST00000606963 623 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 RN7SL544P-201ENST00000617232 284 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 RN7SL763P-201ENST00000620922 284 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 AC025262.3-201ENST00000623666 360 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC188H7C350 IFIT1P1-201ENST00000400497 1449 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC188H7C350 AC087565.3-202ENST00000642085 1603 ntBASIC5.63□□□□□ -1.51
CCDC188H7C350 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CCDC188H7C350 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC188H7C350 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC188H7C350 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC188H7C350 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC188H7C350 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC188H7C350 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC188H7C350 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC188H7C350 CXADRP1-201ENST00000398098 1095 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AL607077.1-201ENST00000401718 499 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 MIR1203-201ENST00000408812 85 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms