Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 RNU6-386P-201ENST00000362650 107 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 RNA5SP472-201ENST00000363868 119 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SKP171-201ENST00000364417 303 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SKP189-201ENST00000365042 330 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MIR323B-201ENST00000385269 82 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 RNA5SP155-201ENST00000411154 129 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 CHCHD3P1-201ENST00000425516 676 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MTCO3P21-201ENST00000430791 643 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 COX7BP2-201ENST00000437976 242 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 HMGB3P6-201ENST00000444896 598 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 OR51P1P-201ENST00000447547 942 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC118758.1-202ENST00000454719 225 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 SNX18P25-201ENST00000510539 758 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 NATP-201ENST00000523491 878 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MT1CP-201ENST00000567054 174 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 CR381653.2-201ENST00000624041 768 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 AC011471.4-201ENST00000638271 216 ntBASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC009831.5-201ENST00000624000 3189 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 RNU6-784P-201ENST00000384330 106 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 RNU6-463P-201ENST00000384340 107 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MIR606-201ENST00000384851 96 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 CDC42P6-201ENST00000421246 576 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AL139184.1-202ENST00000422303 222 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC007365.2-201ENST00000428806 458 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AL121916.1-201ENST00000429405 308 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AL354941.1-201ENST00000438600 464 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 PRDX1P1-201ENST00000449329 596 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AL034399.1-201ENST00000451535 380 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC016724.1-201ENST00000453215 421 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 RPS26P11-201ENST00000463445 348 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 RPS26P6-201ENST00000475156 348 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 RPL29P23-201ENST00000486188 442 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 OR7E157P-201ENST00000494376 911 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MTCO1P31-201ENST00000506355 492 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC114786.4-201ENST00000508771 728 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 NTS-203ENST00000551529 801 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms