Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AC235565.1-201ENST00000456962 1325 ntBASIC5.6□□□□□ -1.51
CISHQ9NSE2 U3.3-201ENST00000362986 216 ntBASIC5.6□□□□□ -1.51
CISHQ9NSE2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AC108161.1-201ENST00000461060 402 ntBASIC5.6□□□□□ -1.51
CISHQ9NSE2 RN7SL189P-201ENST00000468631 289 ntBASIC5.6□□□□□ -1.51
CISHQ9NSE2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AL031658.2-201ENST00000616850 651 ntBASIC5.6□□□□□ -1.51
CISHQ9NSE2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CISHQ9NSE2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CISHQ9NSE2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 RNA5SP90-201ENST00000364801 99 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 RNU1-43P-201ENST00000365052 165 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 OR8V1P-201ENST00000395193 873 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 EI24P4-201ENST00000423683 1078 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC012400.1-201ENST00000518452 381 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 MIR1269B-201ENST00000580405 75 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC016590.3-201ENST00000611171 753 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 AL512624.1-201ENST00000613638 469 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 MIR6826-201ENST00000617808 98 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC026367.3-201ENST00000619032 590 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 AP002505.2-201ENST00000623585 696 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 AC004808.2-201ENST00000627965 773 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CISHQ9NSE2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CISHQ9NSE2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.59□□□□□ -1.51
CISHQ9NSE2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CISHQ9NSE2 AC006210.2-201ENST00000367074 1545 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNU1-74P-201ENST00000384108 171 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNU6-171P-201ENST00000384354 107 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 DUTP5-201ENST00000406790 469 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC079809.1-201ENST00000415468 276 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 HYALP1-201ENST00000417674 1279 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 RPS4XP16-201ENST00000427198 791 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 NANOGP4-201ENST00000427230 913 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AL161722.2-201ENST00000434731 981 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RPS29P10-201ENST00000439197 166 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 CBX1P2-201ENST00000453841 458 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms