Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 CH17-340M24.3-201ENST00000360656 598 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 MIR629-201ENST00000385230 97 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 U3.20-201ENST00000390909 217 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AL356776.1-201ENST00000406574 447 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 MRPL50P2-201ENST00000416821 482 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 PGAM1P6-201ENST00000425684 747 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 HNRNPCP9-201ENST00000426952 859 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AL035410.1-201ENST00000427409 427 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AL049734.2-201ENST00000441066 616 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 NOP56P2-201ENST00000447491 769 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 RN7SL159P-201ENST00000485164 292 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC126182.2-201ENST00000496098 339 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC097173.1-201ENST00000505862 819 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 KRTAP9-12P-201ENST00000514388 532 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC100784.1-201ENST00000522790 310 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC027026.1-201ENST00000532323 742 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC137055.1-201ENST00000549333 395 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 RN7SL366P-201ENST00000577957 292 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 MIR4274-201ENST00000579577 91 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 RN7SL731P-201ENST00000584329 293 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC096708.1-201ENST00000584419 658 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AL589863.1-201ENST00000595383 631 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC010680.3-201ENST00000604215 520 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 BNIP3P10-201ENST00000605360 577 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC124319.3-201ENST00000616832 526 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 GLULP5-201ENST00000547831 1390 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 MAPK10-323ENST00000641493 3207 ntBASIC9.59□□□□□ -0.87
RTN4Q9NQC3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 EEF1A1P16-201ENST00000325349 1414 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RNU6-249P-201ENST00000363016 102 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RPL31P2-201ENST00000413849 377 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RPL4P5-201ENST00000413888 1276 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AL353705.3-201ENST00000418694 1250 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 USP9YP9-201ENST00000429406 715 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RPL23P4-201ENST00000442836 416 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC093019.1-201ENST00000443135 252 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RN7SL706P-201ENST00000460079 292 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AP001992.1-205ENST00000462248 379 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 CENPS-202ENST00000462462 584 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 APOA2-203ENST00000463812 401 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 TAF8-205ENST00000465926 1222 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC083798.1-201ENST00000472671 131 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC093853.1-201ENST00000515689 483 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 STMN2-203ENST00000518491 585 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 CENPUP1-201ENST00000526649 1202 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms