Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIR7155-201ENST00000615925 56 ntBASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF3Q9HD45 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC239868.2-201ENST00000564237 4527 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 SNORA5.1-201ENST00000384275 131 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 MIR223-201ENST00000385204 110 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 SMC4P1-201ENST00000414479 527 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 EEF1B2P5-201ENST00000444820 548 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 RBMY2TP-201ENST00000451162 947 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 VDAC2P4-201ENST00000452925 711 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC079080.1-201ENST00000479841 822 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 PDCL3P4-201ENST00000489621 720 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC105384.2-201ENST00000508433 640 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 OR8Q1P-201ENST00000526467 655 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC073429.2-201ENST00000569694 1444 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 VN1R81P-201ENST00000602085 372 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC019072.1-201ENST00000604535 1551 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 CASC19-222ENST00000641321 1173 ntBASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TM9SF3Q9HD45 AC114774.1-201ENST00000507410 1770 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 HCFC2P1-201ENST00000392864 1592 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 LINC01963-201ENST00000562038 3148 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC097461.1-201ENST00000568928 2821 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RNU6-1320P-201ENST00000390838 107 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RNU6-1269P-201ENST00000391139 107 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RPS6P23-201ENST00000413224 722 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 SLC35E1P1-201ENST00000419313 864 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RPS27P18-201ENST00000431701 247 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC006335.2-201ENST00000437993 330 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 OR52Y1P-201ENST00000452418 828 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RPL7P45-201ENST00000455851 743 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RNU6-599P-201ENST00000459383 107 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RNU6-1193P-201ENST00000459461 107 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 NDUFA5P12-201ENST00000503796 343 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 EIF4A2P5-201ENST00000529914 499 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC126615.2-201ENST00000553003 515 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AL049779.2-201ENST00000553847 315 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC005229.3-201ENST00000603438 323 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RNU6-368P-201ENST00000620928 107 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 RNU6-538P-201ENST00000622329 107 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 SAMMSON-209ENST00000641222 1100 ntBASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM9SF3Q9HD45 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 AL606537.1-201ENST00000607258 2011 ntBASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 RNA5SP183-201ENST00000362452 119 ntBASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.59□□□□□ -1.51
TM9SF3Q9HD45 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms