Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC087752.1-201ENST00000391360 558 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 HMGB1P10-201ENST00000395823 563 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 RN7SKP29-201ENST00000410957 272 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 TATDN1P1-201ENST00000414123 891 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 OR10T1P-201ENST00000424327 947 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 MORF4L1P7-201ENST00000426038 703 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 CYCSP51-201ENST00000443545 318 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 CST12P-201ENST00000457644 362 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 RPS23P2-201ENST00000463671 415 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC078857.1-201ENST00000469870 667 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 SNRPCP3-201ENST00000474888 476 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC008410.1-201ENST00000483777 339 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC104629.1-201ENST00000494226 508 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 RNA5SP340-201ENST00000517132 107 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC113192.3-201ENST00000529152 742 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC006512.2-201ENST00000543250 486 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC006530.1-201ENST00000555980 571 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 CYCSP38-201ENST00000559840 322 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 COX6CP7-201ENST00000597056 208 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AL035661.1-201ENST00000620459 1144 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC145207.9-201ENST00000623802 325 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC021106.3-201ENST00000623925 531 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC005618.4-201ENST00000625053 554 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 CASC19-284ENST00000642142 1868 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 LYARP1-201ENST00000436977 1501 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 AC138907.8-201ENST00000623981 2256 ntBASIC5.53□□□□□ -1.52
BRF2Q9HAW0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRF2Q9HAW0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC133552.1-201ENST00000569988 4007 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC015689.2-201ENST00000528172 1738 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AL354890.1-201ENST00000413730 346 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 RNF10P1-201ENST00000418589 369 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 MARK2P12-201ENST00000420129 585 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 ARL2BPP3-201ENST00000421226 480 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 CACYBPP1-201ENST00000438592 684 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 SCAND3P1-201ENST00000439854 1060 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC093166.4-201ENST00000457867 318 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC005165.2-201ENST00000466070 380 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 RPS17P15-201ENST00000475609 349 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms