Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC126615.2-201ENST00000553003 515 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 AC091078.2-201ENST00000557145 559 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 MIR4505-201ENST00000582238 73 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 AL645933.2-201ENST00000606743 1207 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 AL162574.1-201ENST00000615702 950 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 MIR6810-201ENST00000622701 70 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM4Q9C037 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM4Q9C037 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM4Q9C037 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM4Q9C037 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM4Q9C037 THAP12P9-201ENST00000503971 2360 ntBASIC5.62□□□□□ -1.51
TRIM4Q9C037 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 OR10R3P-201ENST00000361688 942 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 MIR375-201ENST00000362103 64 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 SNORA11-201ENST00000408789 128 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 RPS7P8-201ENST00000418311 581 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 RPL34P3-201ENST00000421454 338 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC113412.1-201ENST00000425840 504 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC108161.1-201ENST00000461060 402 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 SUMO2P4-201ENST00000504193 276 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 GAPDHP71-201ENST00000511530 1003 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 BX510359.5-201ENST00000515651 304 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 SNORA70.20-201ENST00000516848 126 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 IGLV3-24-201ENST00000517477 197 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC233702.9-201ENST00000581528 203 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC006115.2-201ENST00000596823 202 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM4Q9C037 RPSAP73-201ENST00000614820 330 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 AC073342.3-201ENST00000624211 193 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 OR55B1P-203ENST00000641518 2602 ntBASIC5.61□□□□□ -1.51
TRIM4Q9C037 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM4Q9C037 NEAT1-202ENST00000501122 22743 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC025574.1-201ENST00000554784 1653 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC093155.2-201ENST00000420734 937 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 FMO7P-201ENST00000436045 768 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC002504.1-201ENST00000438281 691 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 AL772161.1-201ENST00000439130 476 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 RN7SL329P-201ENST00000467740 299 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 COPS8P2-201ENST00000473228 627 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 RN7SL808P-201ENST00000496066 299 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms