Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC011503.2-201ENST00000594230 1500 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL033543.1-201ENST00000623440 13454 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RNA5SP382-201ENST00000363355 112 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RN7SKP130-201ENST00000364924 301 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC245036.1-201ENST00000391727 309 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL391422.1-201ENST00000402155 436 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RNA5SP155-201ENST00000411154 129 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL390774.1-201ENST00000411924 246 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RPLP1P10-201ENST00000413972 339 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 BTF3P8-201ENST00000414577 526 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RPS17P17-201ENST00000419392 409 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC246680.2-201ENST00000422106 389 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RPS4XP16-201ENST00000427198 791 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC244035.1-201ENST00000430042 390 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 MTATP6P23-201ENST00000440153 476 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC236972.4-201ENST00000458091 963 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 SNX18P26-201ENST00000458433 740 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RPL23AP64-201ENST00000469465 435 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC098818.1-201ENST00000478593 252 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RPL7AP23-201ENST00000482625 776 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC114728.1-201ENST00000488289 483 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC015524.1-201ENST00000491585 472 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC023050.1-201ENST00000498198 304 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 HPRT1P2-201ENST00000505250 544 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 OR5H4P-201ENST00000510851 923 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 RNU6-720P-201ENST00000516363 108 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC024405.1-201ENST00000532521 1042 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AP000619.2-201ENST00000546014 969 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL162632.2-201ENST00000553933 399 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 PPIAP6-201ENST00000557078 499 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC092653.1-201ENST00000608509 531 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AL158063.1-201ENST00000615349 536 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 MIR6503-201ENST00000622884 86 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 AC015804.1-201ENST00000622935 435 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 HSPD1P8-201ENST00000400121 1658 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 SGO1P2-201ENST00000429458 1589 ntBASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
FOXP3Q9BZS1 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AP004289.1-201ENST00000436307 2205 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC079298.1-201ENST00000625026 1619 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC007114.2-201ENST00000576014 4281 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms