Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 BMS1P10-201ENST00000443754 1120 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 MED28P3-201ENST00000444288 531 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 PTMAP3-201ENST00000447474 330 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC005077.1-201ENST00000449226 375 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AL354710.1-201ENST00000453641 246 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 FRG2FP-204ENST00000453982 852 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC009963.3-201ENST00000458090 486 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 RPSAP39-201ENST00000467439 883 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC021205.1-201ENST00000468797 348 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 PRMT5P1-201ENST00000514351 598 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC078899.1-201ENST00000521432 1185 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC107958.1-201ENST00000556576 290 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AL845552.1-201ENST00000556820 323 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC009303.3-201ENST00000591103 736 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 NANOGP3-201ENST00000605855 286 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AL591926.1-201ENST00000620542 217 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC092079.1-201ENST00000558620 1985 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 AC104966.1-201ENST00000467010 1464 ntBASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHRDL1Q9BU40 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 HSPD1P11-201ENST00000508643 1702 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AC010329.2-201ENST00000595195 2737 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 RNFT1P3-201ENST00000340898 1052 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 OR7E156P-201ENST00000400303 464 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AJ239321.1-201ENST00000424255 564 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 PA2G4P6-201ENST00000438325 1197 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 ATP5LP2-201ENST00000440646 311 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 CLIC4P1-201ENST00000453177 535 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AC023194.2-201ENST00000465398 406 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 NPM1P29-201ENST00000483112 803 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 BTG4P1-201ENST00000510421 183 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL359219.2-201ENST00000555184 348 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 MIR4271-201ENST00000582451 67 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AC060766.1-201ENST00000590824 627 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 BMS1P7-201ENST00000602440 1052 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AL353729.2-201ENST00000605859 1249 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 AP001437.1-201ENST00000608783 456 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 MIR6809-201ENST00000612189 116 ntBASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
CHRDL1Q9BU40 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms