Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 AC097463.1-201ENST00000447288 481 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 YRDCP3-201ENST00000456507 480 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC004890.1-201ENST00000461005 181 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC092754.1-201ENST00000472975 479 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC022133.1-201ENST00000490961 571 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 OR9N1P-201ENST00000491296 333 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC090638.1-201ENST00000498296 909 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 BNIP3P1-201ENST00000547295 580 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC105036.1-201ENST00000566222 271 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC011840.5-201ENST00000582125 771 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 QTRT1P1-201ENST00000604344 1078 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC011626.1-201ENST00000604710 562 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 AC024884.1-201ENST00000620583 399 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 TMEM30CP-203ENST00000637814 1035 ntBASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHOXF2Q9BQY4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AL672167.2-201ENST00000377164 879 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 GCNT1P4-201ENST00000404096 329 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 HMGB3P24-201ENST00000433260 622 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 ATP5LP2-201ENST00000440646 311 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 RBMY2AP-201ENST00000445405 1157 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 RBMY2CP-201ENST00000448575 1157 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 RBMY2DP-202ENST00000448881 1157 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 RBMY2BP-202ENST00000451071 1156 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 CFL1P4-201ENST00000451536 498 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 CST12P-201ENST00000457644 362 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 HMGB3P16-201ENST00000508037 287 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 RNA5SP340-201ENST00000517132 107 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC022360.1-201ENST00000521058 340 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC018442.3-201ENST00000523025 183 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AP003396.4-201ENST00000527574 265 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 RN7SL435P-201ENST00000584418 282 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC109583.2-201ENST00000617367 129 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AL121890.2-201ENST00000617644 465 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 BX005214.3-202ENST00000619809 325 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC015871.5-202ENST00000623252 701 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AL390318.1-201ENST00000624564 687 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.57□□□□□ -1.52
RHOXF2Q9BQY4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHOXF2Q9BQY4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RHOXF2Q9BQY4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHOXF2Q9BQY4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHOXF2Q9BQY4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHOXF2Q9BQY4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms