Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC068880.4-201ENST00000623082 495 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC073488.6-201ENST00000632293 754 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC097655.1-201ENST00000635075 318 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 AL645568.2-201ENST00000432815 1337 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.35□□□□□ -1.71
VGLL1Q99990 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 PSG10P-201ENST00000501199 1500 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.34□□□□□ -1.71
VGLL1Q99990 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VGLL1Q99990 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 RN7SKP250-201ENST00000363924 321 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 MIR421-201ENST00000365696 85 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VGLL1Q99990 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC096644.3-201ENST00000416788 338 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AL121882.1-201ENST00000422893 417 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 MTCO2P1-201ENST00000424648 477 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 RPSAP32-201ENST00000432681 526 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 Z99127.2-201ENST00000441426 334 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 BMS1P10-201ENST00000443754 1120 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 MED28P3-201ENST00000444288 531 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 RN7SL197P-201ENST00000466981 299 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 RN7SL568P-201ENST00000493069 298 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 MAST4-IT1-201ENST00000514241 658 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC034244.2-201ENST00000514668 858 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 RNA5SP441-201ENST00000516809 88 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC026407.1-201ENST00000518369 204 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 BTG1P1-201ENST00000540396 508 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.34□□□□□ -1.71
VGLL1Q99990 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AL078601.3-201ENST00000573303 535 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 DPRXP4-201ENST00000578053 568 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 ARGFXP2-201ENST00000579304 949 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC011500.1-201ENST00000601963 469 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC023762.1-201ENST00000603280 584 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AC004908.3-201ENST00000610248 625 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 AL139099.4-201ENST00000614802 114 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 HTR1DP1-201ENST00000616500 888 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 AL035661.1-201ENST00000620459 1144 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 AP000770.2-201ENST00000623694 100 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VGLL1Q99990 CASC19-238ENST00000641523 1558 ntBASIC4.34□□□□□ -1.71
VGLL1Q99990 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VGLL1Q99990 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VGLL1Q99990 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.34□□□□□ -1.72
VGLL1Q99990 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VGLL1Q99990 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
VGLL1Q99990 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
VGLL1Q99990 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
VGLL1Q99990 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms