Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 MTHFD2P5-201ENST00000320415 844 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 RNA5SP335-201ENST00000363817 110 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 U3.28-201ENST00000391249 210 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 SRSF1P1-201ENST00000424058 520 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 PRUNEP1-201ENST00000425846 705 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AL672138.1-201ENST00000450604 1015 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 RNU7-157P-201ENST00000459600 66 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC112184.1-201ENST00000505179 312 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC109464.1-201ENST00000511091 819 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC111000.6-201ENST00000514471 709 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 MIR4489-201ENST00000578869 62 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 MIR3176-201ENST00000582210 90 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AC060766.1-201ENST00000590824 627 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 FKBP1AP1-201ENST00000594588 318 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AP000894.4-201ENST00000610185 483 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 CASC19-255ENST00000641733 1385 ntBASIC5.62□□□□□ -1.51
RPRD1AQ96P16 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RPRD1AQ96P16 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AL133388.1-201ENST00000404509 287 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AL133325.1-201ENST00000421090 382 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 RPL12P17-201ENST00000432393 498 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC073465.2-201ENST00000440938 498 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 OR2AO1P-201ENST00000476497 403 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 RN7SL447P-201ENST00000494711 245 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 HMGB1P44-201ENST00000508597 572 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC079097.1-201ENST00000512187 1399 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AL353796.1-201ENST00000561542 3241 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 MIR6837-201ENST00000620884 64 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 CASC19-264ENST00000641912 1184 ntBASIC5.61□□□□□ -1.51
RPRD1AQ96P16 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms