Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 SNORA51.9-201ENST00000384295 124 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 U3.28-201ENST00000391249 210 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AL391422.1-201ENST00000402155 436 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 RNA5SP431-201ENST00000410312 120 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 GPS2P1-201ENST00000411761 986 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AL357752.1-201ENST00000412817 349 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 THEM7P-201ENST00000419556 672 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 Z82198.3-201ENST00000421145 199 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AL356121.1-201ENST00000442911 156 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 LINC02210-201ENST00000444561 288 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC005077.1-201ENST00000449226 375 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 MTND5P8-201ENST00000449817 1083 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 HMGB1P7-201ENST00000450921 612 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 CBX1P2-201ENST00000453841 458 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 RN7SL254P-201ENST00000460609 284 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 RPS23P2-201ENST00000463671 415 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC113367.2-201ENST00000505749 160 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 IMPA1P1-201ENST00000510718 842 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC068993.1-201ENST00000546724 589 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 SNRPGP1-201ENST00000553864 222 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC092332.1-201ENST00000563684 829 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC005244.1-201ENST00000582566 339 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AL354696.1-201ENST00000614652 497 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 WBP1LP8-201ENST00000617401 327 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC079298.2-201ENST00000623885 459 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AC022417.1-201ENST00000624768 1303 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL360270.2-201ENST00000562952 5985 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 RNU6-31P-201ENST00000384388 108 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 CCNB2P1-201ENST00000399411 1150 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 GCNT1P4-201ENST00000404096 329 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL034374.1-201ENST00000406329 351 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 NIFKP3-201ENST00000417799 865 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 FAM183DP-201ENST00000421987 399 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC006455.6-201ENST00000426192 893 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC009784.1-201ENST00000426484 460 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 CEACAMP11-201ENST00000455211 583 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC021205.1-201ENST00000468797 348 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 RPL12P24-201ENST00000474907 486 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 HMGB1P3-201ENST00000502802 616 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 RN7SKP238-201ENST00000516483 249 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 RNA5SP230-201ENST00000517039 122 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 OR4A17P-201ENST00000526032 904 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC096996.1-201ENST00000563813 325 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 MIR4776-2-201ENST00000580204 80 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms