Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 AC007998.4-201ENST00000612496 2533 ntBASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NEDD1Q8NHV4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC119674.1-204ENST00000641348 1343 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.38-201ENST00000362617 102 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 RPL23AP59-201ENST00000399415 461 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL359092.1-201ENST00000417156 265 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LINC00328-2P-201ENST00000436585 219 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL137845.2-201ENST00000444292 988 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 TVP23CP1-201ENST00000450317 639 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC079841.1-201ENST00000481228 950 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 RN7SL561P-201ENST00000488553 281 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC021146.7-201ENST00000509604 775 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 NDUFS5P6-201ENST00000529136 295 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AP000916.1-201ENST00000533869 835 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC124891.1-201ENST00000536322 519 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 DUXAP1-201ENST00000556632 463 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 BPTFP1-201ENST00000579209 492 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC011500.1-201ENST00000601963 469 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC089999.3-201ENST00000622440 577 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC018692.2-201ENST00000624130 348 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL034408.1-201ENST00000637712 664 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LRRC77P-213ENST00000637727 880 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC074141.1-201ENST00000588129 2995 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AC122713.2-201ENST00000624942 3335 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 NEK2P4-201ENST00000425793 1329 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 AL512310.3-201ENST00000547023 1335 ntBASIC7.78□□□□□ -1.16
NEDD1Q8NHV4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
NEDD1Q8NHV4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
NEDD1Q8NHV4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
NEDD1Q8NHV4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 MTCO1P25-201ENST00000414449 1799 ntBASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 AP003175.1-201ENST00000641383 6658 ntBASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 RPL17P50-201ENST00000396131 546 ntBASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 MIR541-201ENST00000401360 84 ntBASIC7.77□□□□□ -1.17
NEDD1Q8NHV4 ERHP2-201ENST00000402323 299 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms