Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
SYNPOQ8N3V7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC023245.2-201ENST00000530760 2978 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 NACA3P-201ENST00000359690 648 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SNORD116-2-201ENST00000384274 95 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SNORD116-6-201ENST00000384711 96 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SNORA17A-201ENST00000391185 133 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 RN7SKP281-201ENST00000410472 352 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 RPL36P18-201ENST00000419316 318 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 RPS3P2-201ENST00000421346 701 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL365338.1-201ENST00000422282 858 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL139415.1-201ENST00000424862 352 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC097721.1-201ENST00000427150 1253 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SETP8-201ENST00000435341 628 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 HMGB1P45-201ENST00000435986 653 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL929288.2-201ENST00000446368 407 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 DNAJC19P8-201ENST00000452887 259 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 NDUFA5P9-201ENST00000472609 340 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AP000563.1-201ENST00000490865 758 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC063943.2-201ENST00000495697 534 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC034244.1-201ENST00000507687 207 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 RNA5SP206-201ENST00000516703 121 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC084337.1-201ENST00000524809 686 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 OSBPL9P5-201ENST00000542581 171 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC079905.1-201ENST00000549280 475 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 VN1R83P-201ENST00000595685 445 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC073046.2-201ENST00000604756 527 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SNORA17.5-201ENST00000630429 132 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC129915.3-201ENST00000634128 948 ntBASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNPOQ8N3V7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 IGKV7-3-201ENST00000357453 298 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 RNU6-1339P-201ENST00000363574 91 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 RNU4-40P-201ENST00000364351 143 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 RN7SKP69-201ENST00000365390 305 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 RN7SKP81-201ENST00000365603 331 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 SUGT1P2-201ENST00000379452 992 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 AL031985.1-201ENST00000392713 418 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 HMGB3P7-201ENST00000400214 611 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 AL049545.1-201ENST00000401856 572 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 AC107081.1-201ENST00000414975 361 ntBASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNPOQ8N3V7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms