Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 SNORA17A-201ENST00000391185 133 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 RN7SKP293-201ENST00000411389 296 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AL121878.1-201ENST00000418638 859 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC017019.1-201ENST00000426129 261 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 RPL12P24-201ENST00000474907 486 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 RPSAP51-201ENST00000497462 645 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 IGBP1P4-201ENST00000503202 879 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC021193.1-201ENST00000511607 420 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 RNU6-1334P-201ENST00000516032 105 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 CDC42P3-201ENST00000518493 633 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC005341.1-201ENST00000571086 708 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC107993.1-201ENST00000591343 684 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC010245.2-201ENST00000606908 1167 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC109583.2-201ENST00000617367 129 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 SNORA17.5-201ENST00000630429 132 ntBASIC6□□□□□ -1.45
CCDC65Q8IXS2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC65Q8IXS2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC65Q8IXS2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AL391422.1-201ENST00000402155 436 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 GABARAPL3-201ENST00000412799 354 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC012075.1-201ENST00000436549 580 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 RANP1-206ENST00000455094 651 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC100832.1-201ENST00000471945 383 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 RN7SL466P-201ENST00000497546 295 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 UGT2A3P7-201ENST00000510485 734 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC009027.1-201ENST00000604510 479 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC000068.2-201ENST00000608816 460 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 AC026124.2-201ENST00000621847 656 ntBASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC65Q8IXS2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC093591.2-201ENST00000565254 3843 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 RNA5SP234-201ENST00000363916 119 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SNORA5.1-201ENST00000384275 131 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms