Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RN7SL244P-201ENST00000493405 297 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 DSTNP2-201ENST00000504533 515 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 AC012339.2-201ENST00000523996 453 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 SNORD46.1-201ENST00000364139 104 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 RPL23AP83-201ENST00000434984 473 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC092754.1-201ENST00000472975 479 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 H3F3BP2-201ENST00000583907 357 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AL591034.3-201ENST00000605511 685 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC097063.1-201ENST00000426714 1797 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 RN7SKP145-201ENST00000363291 303 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC016831.4-201ENST00000438302 307 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC000111.2-201ENST00000448200 210 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AL691482.1-201ENST00000453255 87 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 GAPDHP62-201ENST00000515313 990 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC020915.5-201ENST00000596836 964 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 MTCO1P15-201ENST00000529569 1526 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC009237.10-201ENST00000414112 510 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC009237.5-201ENST00000414271 501 ntBASIC4.14□□□□□ -1.75
VPS13CQ709C8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VPS13CQ709C8 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS13CQ709C8 RNF10P1-201ENST00000418589 369 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AC006967.1-201ENST00000467608 589 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 OR2A3P-201ENST00000493774 953 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AC006065.1-201ENST00000422539 802 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 NOP56P2-201ENST00000447491 769 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 SCARNA10-201ENST00000459255 330 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 SNORA59A-201ENST00000459326 152 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 AC093827.1-201ENST00000480094 861 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms