Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC018558.5-201ENST00000565840 952 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 MT1L-202ENST00000566367 78 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC141257.3-201ENST00000572906 215 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC090312.2-201ENST00000582687 378 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC104184.1-201ENST00000607513 721 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 RN7SL82P-201ENST00000611435 237 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 MIR6774-201ENST00000614651 70 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 RN7SL628P-201ENST00000619139 237 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC015967.1-201ENST00000619893 476 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 MIR8062-201ENST00000621515 85 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC100810.3-201ENST00000633189 2240 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 PNPT1P2-201ENST00000456768 2050 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC027279.1-201ENST00000568885 4284 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 CASC19-243ENST00000641588 1546 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 Y_RNA.100-201ENST00000363141 102 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 RNU6-472P-201ENST00000384299 107 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 RNA5SP297-201ENST00000391029 113 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 Y_RNA.615-201ENST00000410769 117 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 ATP5BP1-201ENST00000411980 1574 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 DBF4P1-201ENST00000412976 1892 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 IFNA12P-201ENST00000413147 571 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 AL590135.1-201ENST00000422215 156 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 FABP7P2-201ENST00000429946 379 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 RPS6P12-201ENST00000432491 726 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 BMS1P19-201ENST00000433925 393 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC006335.2-201ENST00000437993 330 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 RPL7P14-201ENST00000449851 741 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 RPL7P17-201ENST00000470927 724 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC106872.2-201ENST00000494303 480 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 MTND1P19-201ENST00000511780 315 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 RNA5SP216-201ENST00000516111 123 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC022861.1-201ENST00000522981 663 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 HNRNPCP8-201ENST00000528764 888 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AP002812.4-201ENST00000532139 286 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 NF1P12-201ENST00000549593 583 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 RN7SL786P-201ENST00000579130 298 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 AF121897.1-201ENST00000411867 3980 ntBASIC8.5□□□□□ -1.05
VARS2Q5ST30 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.5□□□□□ -1.05
VARS2Q5ST30 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VARS2Q5ST30 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
VARS2Q5ST30 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
VARS2Q5ST30 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VARS2Q5ST30 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.49□□□□□ -1.05
VARS2Q5ST30 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms