Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AP000943.4-201ENST00000622912 357 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 MTCO1P4-201ENST00000520516 1409 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL158152.1-201ENST00000602652 1435 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 RNA5SP211-201ENST00000365516 117 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 RNA5SP431-201ENST00000410312 120 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 NMD3P2-201ENST00000421815 761 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 OR6K4P-201ENST00000423179 955 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 RPL12P12-201ENST00000424633 501 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC099670.2-201ENST00000435130 321 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 FTLP8-201ENST00000446770 267 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 PPIAP7-201ENST00000454070 489 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 PSMC1P13-201ENST00000458195 985 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AL603882.1-201ENST00000463059 681 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC021205.1-201ENST00000468797 348 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 RN7SL568P-201ENST00000493069 298 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC108103.1-201ENST00000511286 446 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC111000.6-201ENST00000514471 709 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 RNU6-1308P-201ENST00000516817 103 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AP000620.1-201ENST00000527147 504 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC090424.1-201ENST00000535243 736 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC121758.1-202ENST00000556917 658 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC007346.1-201ENST00000569208 867 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 OR1E3-201ENST00000575608 948 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 RN7SL230P-201ENST00000580835 303 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC079880.2-201ENST00000603790 1213 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AL645933.2-201ENST00000606743 1207 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AC092681.3-201ENST00000609463 678 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 uc_338.31-201ENST00000615595 186 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 AL357140.4-201ENST00000636827 412 ntBASIC6.06□□□□□ -1.44
CCDC38Q502W7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC38Q502W7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC38Q502W7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 VPS35P1-201ENST00000563400 1518 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 RN7SKP171-201ENST00000364417 303 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 RNU6-1176P-201ENST00000390955 107 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 HMGB1P10-201ENST00000395823 563 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 ATP5HP3-201ENST00000396994 486 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 GCNT1P4-201ENST00000404096 329 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AL136131.1-201ENST00000406079 803 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 SNRPEP6-201ENST00000407465 277 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 RNU4-74P-201ENST00000411280 161 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 METTL15P3-201ENST00000415522 1221 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC130360.1-201ENST00000425489 1117 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms