Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AL450023.1-201ENST00000450868 751 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 CEACAMP11-201ENST00000455211 583 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RN7SL583P-201ENST00000475692 287 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC087672.1-201ENST00000479876 766 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RPS27AP18-201ENST00000515536 459 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC130364.2-201ENST00000528639 604 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 OR1E3-201ENST00000575608 948 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RN7SL371P-201ENST00000578099 267 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC124916.2-201ENST00000604416 224 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC003973.3-201ENST00000624863 2822 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 RN7SKP199-201ENST00000410325 305 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC006335.2-201ENST00000437993 330 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC022133.1-201ENST00000490961 571 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 OR4A41P-201ENST00000533053 928 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC006349.1-201ENST00000555526 235 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PRPF19P1-201ENST00000584766 898 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC133552.5-201ENST00000604266 540 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 AC109583.2-201ENST00000617367 129 ntBASIC4.82□□□□□ -1.64
CCDC58Q4VC31 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC58Q4VC31 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AL592182.3-201ENST00000642132 3304 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms