Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 CASC19-284ENST00000642142 1868 ntBASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 SEC63P2-201ENST00000503863 1939 ntBASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 RNU1-59P-201ENST00000364829 162 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 RN7SKP69-201ENST00000365390 305 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 SUGT1P2-201ENST00000379452 992 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 U3.43-201ENST00000410734 213 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 RPS7P14-201ENST00000426405 583 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AL592437.1-201ENST00000443781 492 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 HIGD1AP16-201ENST00000450986 258 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC037198.2-201ENST00000478845 733 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 OR5H7P-201ENST00000514084 930 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 PRMT5P1-201ENST00000514351 598 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 Y_RNA.717-201ENST00000517106 92 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AP003080.1-202ENST00000526526 915 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 BNIP3P32-201ENST00000600015 554 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AL133243.2-201ENST00000610331 1621 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 U1.25-201ENST00000614085 162 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AL512652.1-201ENST00000619006 500 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AL035461.2-201ENST00000619201 524 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 U1.31-201ENST00000620022 160 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC091305.2-201ENST00000624049 1576 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 AC139713.2-210ENST00000641741 992 ntBASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC144BQ3MJ40 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 SNORA11B-201ENST00000408175 129 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 RN7SKP121-201ENST00000410842 305 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 TCEA1P4-201ENST00000415066 844 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 CYP4F30P-202ENST00000420048 405 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 CYCSP11-201ENST00000436426 315 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC092170.1-201ENST00000440211 356 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 TPTE2P3-201ENST00000441562 1189 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AL022237.1-201ENST00000446663 358 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 MRPL35P2-201ENST00000448009 511 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 TRY2P-201ENST00000448860 689 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 OR51B8P-201ENST00000449892 769 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms