Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SRSF4Q08170 RNA5SP433-201ENST00000364491 114 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 RNA5SP478-201ENST00000364657 115 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SRSF4Q08170 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 PSMA6P1-201ENST00000400275 741 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 VIM2P-201ENST00000402383 1294 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 MRPS21P5-201ENST00000417885 231 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 MFSD13B-201ENST00000420133 1290 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 GAPDHP57-201ENST00000424400 585 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 VN1R20P-201ENST00000425215 966 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC005345.1-201ENST00000431868 217 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC046176.1-201ENST00000435260 1170 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC110602.1-201ENST00000437414 318 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 FABP5P3-201ENST00000437960 408 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AL445567.1-201ENST00000439121 144 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC016772.1-201ENST00000444170 1261 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 POU5F1P5-201ENST00000445059 658 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.31□□□□□ -1.56
SRSF4Q08170 RN7SL39P-201ENST00000462264 297 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC090602.1-201ENST00000469695 252 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 RPS17P11-201ENST00000474297 293 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 UGT2A3P7-201ENST00000510485 734 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 SNX18P23-201ENST00000510867 677 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC093752.1-206ENST00000511823 336 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC093755.1-201ENST00000512950 1023 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 MTCYBP20-201ENST00000524239 1129 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.31□□□□□ -1.56
SRSF4Q08170 HMGN2P47-201ENST00000559378 272 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC012213.3-201ENST00000577199 777 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC005242.1-201ENST00000585658 438 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AL049840.5-201ENST00000602827 552 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 FRG1DP-201ENST00000635586 771 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC010325.3-201ENST00000641084 394 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 AC022164.1-201ENST00000568767 2673 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SRSF4Q08170 AL161912.4-201ENST00000623889 2468 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 AC125238.2-201ENST00000430003 1440 ntBASIC5.31□□□□□ -1.56
SRSF4Q08170 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRSF4Q08170 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.3□□□□□ -1.56
SRSF4Q08170 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 AC053481.2-202ENST00000582394 1500 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRSF4Q08170 Y_RNA.51-201ENST00000362725 102 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.3□□□□□ -1.56
SRSF4Q08170 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRSF4Q08170 U3.52-201ENST00000384034 216 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 UBBP1-201ENST00000392399 473 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 SNORA79B-201ENST00000410557 148 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.3□□□□□ -1.56
SRSF4Q08170 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.3□□□□□ -1.56
SRSF4Q08170 AL449283.1-202ENST00000418249 604 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.3□□□□□ -1.56
SRSF4Q08170 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.3□□□□□ -1.56
SRSF4Q08170 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.3□□□□□ -1.56
SRSF4Q08170 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.3□□□□□ -1.56
SRSF4Q08170 DLGAP5P1-201ENST00000430307 464 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 PTP4A1P3-201ENST00000433661 420 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 AL645939.3-201ENST00000435408 225 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 GTF2IP14-201ENST00000441415 586 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 ARL4AP3-201ENST00000441452 574 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.3□□□□□ -1.56
SRSF4Q08170 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms