Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RHBDL3P58872 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RHBDL3P58872 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RHBDL3P58872 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.79□□□□□ -1.32
RHBDL3P58872 AC007382.1-201ENST00000624376 2618 ntBASIC6.79□□□□□ -1.32
RHBDL3P58872 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.78□□□□□ -1.32
RHBDL3P58872 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RHBDL3P58872 RN7SKP59-201ENST00000410520 314 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AL365220.1-201ENST00000432923 399 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AC006335.2-201ENST00000437993 330 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AL513321.1-201ENST00000441175 761 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 VDAC2P4-201ENST00000452925 711 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.78□□□□□ -1.32
RHBDL3P58872 OSTCP1-201ENST00000455507 450 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 RNU1-88P-201ENST00000459274 128 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AC092691.2-201ENST00000461787 803 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AC100832.1-201ENST00000471945 383 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 TRBV5-2-201ENST00000489095 273 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 DUTP1-201ENST00000493631 470 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 MTND3P24-201ENST00000506306 329 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.78□□□□□ -1.32
RHBDL3P58872 RNA5SP34-201ENST00000516887 130 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AC078899.1-201ENST00000521432 1185 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AC134349.2-201ENST00000535136 910 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.78□□□□□ -1.32
RHBDL3P58872 MIR1269B-201ENST00000580405 75 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 SUGT1P3-202ENST00000604259 383 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 PPATP2-201ENST00000605635 508 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 SDR42E1P1-201ENST00000611327 477 ntBASIC6.78□□□□□ -1.32
RHBDL3P58872 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.78□□□□□ -1.32
RHBDL3P58872 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.78□□□□□ -1.32
RHBDL3P58872 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RHBDL3P58872 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
RHBDL3P58872 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RHBDL3P58872 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 AC010168.2-201ENST00000562691 5428 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.77□□□□□ -1.33
RHBDL3P58872 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RHBDL3P58872 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.77□□□□□ -1.33
RHBDL3P58872 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RHBDL3P58872 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.77□□□□□ -1.33
RHBDL3P58872 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
RHBDL3P58872 AL034374.1-201ENST00000406329 351 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 USP9YP19-201ENST00000412165 485 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.77□□□□□ -1.33
RHBDL3P58872 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.77□□□□□ -1.33
RHBDL3P58872 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.77□□□□□ -1.33
RHBDL3P58872 RN7SL515P-201ENST00000463999 297 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.77□□□□□ -1.33
RHBDL3P58872 RN7SL727P-201ENST00000482164 296 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 SNORA26.10-201ENST00000516427 141 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 IGLV3-24-201ENST00000517477 197 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.77□□□□□ -1.33
RHBDL3P58872 AC090607.5-201ENST00000615692 224 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 MIR8080-201ENST00000622224 89 ntBASIC6.77□□□□□ -1.33
RHBDL3P58872 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RHBDL3P58872 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.77□□□□□ -1.33
RHBDL3P58872 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.77□□□□□ -1.33
RHBDL3P58872 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.77□□□□□ -1.33
RHBDL3P58872 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RHBDL3P58872 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RHBDL3P58872 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
RHBDL3P58872 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms