Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HMGN1P15-201ENST00000513870 295 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC016550.3-201ENST00000515706 767 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 RNA5SP230-201ENST00000517039 122 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC067904.2-201ENST00000517322 1283 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN20P56880 AC079600.1-201ENST00000550326 297 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN20P56880 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN20P56880 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 AC079148.1-201ENST00000565944 819 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN20P56880 MIR3614-201ENST00000581261 86 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN20P56880 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN20P56880 LSM1P2-201ENST00000604911 322 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC105148.1-201ENST00000604961 409 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AL355974.3-201ENST00000617383 467 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLDN20P56880 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC009501.3-201ENST00000605001 1352 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CLDN20P56880 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 AL356317.1-201ENST00000396110 1436 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC106872.5-201ENST00000508856 1416 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC017002.4-201ENST00000604721 1525 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 RNU6-1251P-201ENST00000364502 107 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN20P56880 RNA5SP122-201ENST00000384457 108 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC087752.1-201ENST00000391360 558 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AL031985.1-201ENST00000392713 418 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 PTGES3P2-201ENST00000407942 482 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 SEC63P1-201ENST00000425785 1258 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 MTND6P12-201ENST00000428247 522 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 RPS26P4-201ENST00000431743 355 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 GAPDHP14-201ENST00000450472 937 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AL445665.1-202ENST00000452436 324 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 AC010468.3-201ENST00000508225 458 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 RFPL4AP3-201ENST00000515267 345 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 SNORA70.20-201ENST00000516848 126 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 AC126615.2-201ENST00000553003 515 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC007346.2-201ENST00000564816 892 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC015802.2-201ENST00000589690 189 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC006115.2-201ENST00000596823 202 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN20P56880 AC135178.6-201ENST00000605314 398 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC026124.2-201ENST00000621847 656 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC022919.1-201ENST00000624979 626 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLDN20P56880 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 AC003985.2-201ENST00000562268 1669 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN20P56880 AP004607.3-201ENST00000530354 3915 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 AC092376.2-201ENST00000622621 4116 ntBASIC5.24□□□□□ -1.57
CLDN20P56880 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN20P56880 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 AC015689.2-201ENST00000528172 1738 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLDN20P56880 MIR375-201ENST00000362103 64 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 RN7SKP292-201ENST00000365522 317 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms