Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.65□□□□□ -1.51
SUMO3P55854 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 AP001541.1-201ENST00000623322 1904 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 RNU4-22P-201ENST00000411058 166 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 BTF3P8-201ENST00000414577 526 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 BMS1P13-201ENST00000417301 885 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 RPS7P8-201ENST00000418311 581 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 OR2X1P-201ENST00000421144 687 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 YWHAEP5-201ENST00000431545 765 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 RPL31P44-201ENST00000447680 377 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AL589880.1-201ENST00000448271 287 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 RN7SL254P-201ENST00000460609 284 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 AP002453.1-201ENST00000492327 668 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 AC074087.1-201ENST00000512059 724 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 ZNF519P4-201ENST00000514008 125 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 AC116917.1-201ENST00000520558 305 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.64□□□□□ -1.51
SUMO3P55854 DEFB130C-202ENST00000530001 230 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.64□□□□□ -1.51
SUMO3P55854 AC036111.2-201ENST00000533247 901 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 POLR2KP1-201ENST00000553226 168 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 CYP2C60P-201ENST00000566088 139 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC090651.1-201ENST00000567865 634 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 AC090525.3-201ENST00000605601 189 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 RPSAP75-201ENST00000605848 301 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AL135999.3-201ENST00000610501 812 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AL138478.1-201ENST00000612252 832 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 uc_338.29-201ENST00000615099 168 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SUMO3P55854 U1.31-201ENST00000620022 160 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 AC136428.4-201ENST00000634254 1155 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 U6.107-201ENST00000637108 79 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 AC011416.1-201ENST00000514947 1732 ntBASIC5.64□□□□□ -1.51
SUMO3P55854 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SUMO3P55854 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SUMO3P55854 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SUMO3P55854 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.63□□□□□ -1.51
SUMO3P55854 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 AL137100.1-201ENST00000556703 1620 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms