Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC005005.4-201ENST00000623789 16698 ntBASIC5.58□□□□□ -1.52
CDH6P55285 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CDH6P55285 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 AC027279.1-201ENST00000568885 4284 ntBASIC5.58□□□□□ -1.52
CDH6P55285 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CDH6P55285 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH6P55285 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 MIR133A2-201ENST00000347538 102 ntBASIC5.57□□□□□ -1.52
CDH6P55285 RNU1-19P-201ENST00000363306 165 ntBASIC5.57□□□□□ -1.52
CDH6P55285 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
CDH6P55285 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 AL389925.1-201ENST00000432257 728 ntBASIC5.57□□□□□ -1.52
CDH6P55285 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 AC090804.1-201ENST00000448870 490 ntBASIC5.57□□□□□ -1.52
CDH6P55285 CBX1P2-201ENST00000453841 458 ntBASIC5.57□□□□□ -1.52
CDH6P55285 AC023141.9-201ENST00000458734 412 ntBASIC5.57□□□□□ -1.52
CDH6P55285 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH6P55285 RPSAP39-201ENST00000467439 883 ntBASIC5.57□□□□□ -1.52
CDH6P55285 AC093827.1-201ENST00000480094 861 ntBASIC5.57□□□□□ -1.52
CDH6P55285 EIF1P7-201ENST00000487533 337 ntBASIC5.57□□□□□ -1.52
CDH6P55285 AC112184.1-201ENST00000505179 312 ntBASIC5.57□□□□□ -1.52
CDH6P55285 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH6P55285 AC027216.1-201ENST00000577726 685 ntBASIC5.57□□□□□ -1.52
CDH6P55285 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 AC010245.2-201ENST00000606908 1167 ntBASIC5.57□□□□□ -1.52
CDH6P55285 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 AC112198.2-201ENST00000426589 6996 ntBASIC5.57□□□□□ -1.52
CDH6P55285 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CDH6P55285 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH6P55285 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH6P55285 CASC19-248ENST00000641674 1356 ntBASIC5.56□□□□□ -1.52
CDH6P55285 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CDH6P55285 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDH6P55285 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
CDH6P55285 MIR323A-201ENST00000362199 86 ntBASIC5.56□□□□□ -1.52
CDH6P55285 MIR133B-201ENST00000362210 119 ntBASIC5.56□□□□□ -1.52
CDH6P55285 RN7SKP69-201ENST00000365390 305 ntBASIC5.56□□□□□ -1.52
CDH6P55285 RN7SKP81-201ENST00000365603 331 ntBASIC5.56□□□□□ -1.52
CDH6P55285 OR1L6-202ENST00000373684 1044 ntBASIC5.56□□□□□ -1.52
CDH6P55285 MIR143-201ENST00000385300 106 ntBASIC5.56□□□□□ -1.52
CDH6P55285 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH6P55285 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.56□□□□□ -1.52
CDH6P55285 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC090018.1-201ENST00000434369 367 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH6P55285 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.56□□□□□ -1.52
CDH6P55285 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH6P55285 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH6P55285 RNU7-157P-201ENST00000459600 66 ntBASIC5.56□□□□□ -1.52
CDH6P55285 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH6P55285 RPL35AP19-201ENST00000469425 329 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC100832.1-201ENST00000471945 383 ntBASIC5.56□□□□□ -1.52
CDH6P55285 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 RPS12P31-201ENST00000491419 398 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC104109.1-201ENST00000498563 436 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH6P55285 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH6P55285 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.56□□□□□ -1.52
CDH6P55285 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH6P55285 IGKV3D-34-201ENST00000522638 302 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.56□□□□□ -1.52
CDH6P55285 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
CDH6P55285 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.56□□□□□ -1.52
CDH6P55285 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH6P55285 BLZF2P-201ENST00000553776 1130 ntBASIC5.56□□□□□ -1.52
CDH6P55285 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDH6P55285 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.56□□□□□ -1.52
CDH6P55285 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDH6P55285 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH6P55285 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms