Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CASP4P49662 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 TRAV35-201ENST00000390462 330 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC009804.1-201ENST00000400949 179 ntBASIC5.8□□□□□ -1.48
CASP4P49662 HYALP1-201ENST00000417674 1279 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AL133325.1-201ENST00000421090 382 ntBASIC5.8□□□□□ -1.48
CASP4P49662 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 AC124944.2-201ENST00000429866 1242 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC016772.1-201ENST00000444170 1261 ntBASIC5.8□□□□□ -1.48
CASP4P49662 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.8□□□□□ -1.48
CASP4P49662 CBX1P5-201ENST00000475330 559 ntBASIC5.8□□□□□ -1.48
CASP4P49662 RPS12P31-201ENST00000491419 398 ntBASIC5.8□□□□□ -1.48
CASP4P49662 RPS26P24-201ENST00000497656 331 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC026782.2-201ENST00000510845 636 ntBASIC5.8□□□□□ -1.48
CASP4P49662 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.8□□□□□ -1.48
CASP4P49662 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.8□□□□□ -1.48
CASP4P49662 HMGB1P40-201ENST00000525121 540 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.8□□□□□ -1.48
CASP4P49662 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.8□□□□□ -1.48
CASP4P49662 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CASP4P49662 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.8□□□□□ -1.48
CASP4P49662 FKBP1AP1-201ENST00000594588 318 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC109309.2-201ENST00000612597 332 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AL589935.2-201ENST00000616471 1231 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC026367.3-201ENST00000619032 590 ntBASIC5.8□□□□□ -1.48
CASP4P49662 MIR4302-201ENST00000638058 60 ntBASIC5.8□□□□□ -1.48
CASP4P49662 Z95114.1-201ENST00000624264 14574 ntBASIC5.8□□□□□ -1.48
CASP4P49662 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CASP4P49662 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CASP4P49662 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CASP4P49662 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CASP4P49662 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CASP4P49662 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CASP4P49662 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CASP4P49662 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CASP4P49662 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CASP4P49662 OR9G4-201ENST00000302957 984 ntBASIC5.79□□□□□ -1.48
CASP4P49662 RN7SKP162-201ENST00000363605 345 ntBASIC5.79□□□□□ -1.48
CASP4P49662 RNU1-146P-201ENST00000364015 165 ntBASIC5.79□□□□□ -1.48
CASP4P49662 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 OR1L6-202ENST00000373684 1044 ntBASIC5.79□□□□□ -1.48
CASP4P49662 AC079809.1-201ENST00000415468 276 ntBASIC5.79□□□□□ -1.48
CASP4P49662 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP4P49662 HSPD1P12-201ENST00000429127 1069 ntBASIC5.79□□□□□ -1.48
CASP4P49662 RPL7L1P9-201ENST00000431298 745 ntBASIC5.79□□□□□ -1.48
CASP4P49662 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP4P49662 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.79□□□□□ -1.48
CASP4P49662 AC011225.1-201ENST00000457751 369 ntBASIC5.79□□□□□ -1.48
CASP4P49662 AL133445.1-201ENST00000467051 452 ntBASIC5.79□□□□□ -1.48
CASP4P49662 RPL7P41-201ENST00000485823 957 ntBASIC5.79□□□□□ -1.48
CASP4P49662 KATNBL1P4-201ENST00000503545 918 ntBASIC5.79□□□□□ -1.48
CASP4P49662 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP4P49662 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.79□□□□□ -1.48
CASP4P49662 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CASP4P49662 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CASP4P49662 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP4P49662 AL162431.4-201ENST00000604674 411 ntBASIC5.79□□□□□ -1.48
CASP4P49662 AC011626.1-201ENST00000604710 562 ntBASIC5.79□□□□□ -1.48
CASP4P49662 AC016252.1-201ENST00000609721 474 ntBASIC5.79□□□□□ -1.48
CASP4P49662 CYP4F35P-202ENST00000636121 390 ntBASIC5.79□□□□□ -1.48
CASP4P49662 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CASP4P49662 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP4P49662 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP4P49662 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CASP4P49662 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP4P49662 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP4P49662 OR55B1P-203ENST00000641518 2602 ntBASIC5.78□□□□□ -1.48
CASP4P49662 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CASP4P49662 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 RNA5SP487-201ENST00000410186 122 ntBASIC5.78□□□□□ -1.48
CASP4P49662 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.78□□□□□ -1.48
CASP4P49662 NPM1P4-201ENST00000414095 812 ntBASIC5.78□□□□□ -1.48
CASP4P49662 REREP1Y-201ENST00000422655 198 ntBASIC5.78□□□□□ -1.48
CASP4P49662 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 REREP2Y-201ENST00000439103 200 ntBASIC5.78□□□□□ -1.48
CASP4P49662 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP4P49662 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP4P49662 PGAM1P13-201ENST00000507497 754 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms