Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 AC021242.1-201ENST00000507315 2035 ntBASIC4.82□□□□□ -1.64
SRP9P49458 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 MTCO1P15-201ENST00000529569 1526 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRP9P49458 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRP9P49458 AL450345.1-202ENST00000605741 3881 ntBASIC4.81□□□□□ -1.64
SRP9P49458 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.81□□□□□ -1.64
SRP9P49458 AC114947.2-201ENST00000565748 2125 ntBASIC4.81□□□□□ -1.64
SRP9P49458 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRP9P49458 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRP9P49458 RNA5SP46-201ENST00000362370 120 ntBASIC4.81□□□□□ -1.64
SRP9P49458 RNA5SP30-201ENST00000365552 115 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC007618.1-201ENST00000366455 732 ntBASIC4.81□□□□□ -1.64
SRP9P49458 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SRP9P49458 RNA5SP178-201ENST00000410380 128 ntBASIC4.81□□□□□ -1.64
SRP9P49458 RN7SKP97-201ENST00000410966 333 ntBASIC4.81□□□□□ -1.64
SRP9P49458 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC093155.2-201ENST00000420734 937 ntBASIC4.81□□□□□ -1.64
SRP9P49458 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SRP9P49458 MTND6P12-201ENST00000428247 522 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.81□□□□□ -1.64
SRP9P49458 Z84478.1-201ENST00000438230 1219 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.81□□□□□ -1.64
SRP9P49458 AC005297.1-201ENST00000444765 862 ntBASIC4.81□□□□□ -1.64
SRP9P49458 RPS23P6-201ENST00000466136 431 ntBASIC4.81□□□□□ -1.64
SRP9P49458 ATP5LP5-201ENST00000483050 299 ntBASIC4.81□□□□□ -1.64
SRP9P49458 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 AL049874.2-201ENST00000492636 288 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.81□□□□□ -1.64
SRP9P49458 SNORA43.3-201ENST00000517240 103 ntBASIC4.81□□□□□ -1.64
SRP9P49458 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.81□□□□□ -1.64
SRP9P49458 PMS2P3-207ENST00000529061 717 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.81□□□□□ -1.64
SRP9P49458 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.81□□□□□ -1.64
SRP9P49458 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 AL049872.1-201ENST00000556323 322 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC010547.6-201ENST00000571789 193 ntBASIC4.81□□□□□ -1.64
SRP9P49458 MIR4311-201ENST00000580794 100 ntBASIC4.81□□□□□ -1.64
SRP9P49458 H3F3BP2-201ENST00000583907 357 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.81□□□□□ -1.64
SRP9P49458 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.81□□□□□ -1.64
SRP9P49458 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.81□□□□□ -1.64
SRP9P49458 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 SAMMSON-227ENST00000642114 1199 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 CDC27P2-201ENST00000425026 1922 ntBASIC4.81□□□□□ -1.64
SRP9P49458 AC026523.2-201ENST00000625039 7739 ntBASIC4.81□□□□□ -1.64
SRP9P49458 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRP9P49458 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.81□□□□□ -1.64
SRP9P49458 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRP9P49458 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SRP9P49458 AC004817.4-201ENST00000602396 3625 ntBASIC4.8□□□□□ -1.64
SRP9P49458 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRP9P49458 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.8□□□□□ -1.64
SRP9P49458 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRP9P49458 TMSB4XP4-201ENST00000323496 618 ntBASIC4.8□□□□□ -1.64
SRP9P49458 RN7SKP292-201ENST00000365522 317 ntBASIC4.8□□□□□ -1.64
SRP9P49458 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.8□□□□□ -1.64
SRP9P49458 RNA5SP122-201ENST00000384457 108 ntBASIC4.8□□□□□ -1.64
SRP9P49458 AL031985.1-201ENST00000392713 418 ntBASIC4.8□□□□□ -1.64
SRP9P49458 VDAC2P1-201ENST00000399358 958 ntBASIC4.8□□□□□ -1.64
SRP9P49458 GAPDHP42-201ENST00000406848 981 ntBASIC4.8□□□□□ -1.64
SRP9P49458 CBX1P3-201ENST00000413296 527 ntBASIC4.8□□□□□ -1.64
SRP9P49458 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.8□□□□□ -1.64
SRP9P49458 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.8□□□□□ -1.64
SRP9P49458 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.8□□□□□ -1.64
SRP9P49458 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.8□□□□□ -1.64
SRP9P49458 AC064862.4-201ENST00000442180 334 ntBASIC4.8□□□□□ -1.64
SRP9P49458 AL161636.2-201ENST00000445179 927 ntBASIC4.8□□□□□ -1.64
SRP9P49458 RPL36AP39-201ENST00000445859 318 ntBASIC4.8□□□□□ -1.64
SRP9P49458 HMGN1P36-201ENST00000446623 298 ntBASIC4.8□□□□□ -1.64
SRP9P49458 PRPF38AP1-201ENST00000451976 933 ntBASIC4.8□□□□□ -1.64
SRP9P49458 AC020779.1-201ENST00000478757 796 ntBASIC4.8□□□□□ -1.64
SRP9P49458 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRP9P49458 PPIAP19-201ENST00000486414 492 ntBASIC4.8□□□□□ -1.64
SRP9P49458 USP9YP2-201ENST00000504503 1000 ntBASIC4.8□□□□□ -1.64
SRP9P49458 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.8□□□□□ -1.64
SRP9P49458 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.8□□□□□ -1.64
SRP9P49458 AC016559.2-201ENST00000510759 359 ntBASIC4.8□□□□□ -1.64
SRP9P49458 AC098976.1-201ENST00000513014 541 ntBASIC4.8□□□□□ -1.64
SRP9P49458 USP9YP1-201ENST00000513521 1002 ntBASIC4.8□□□□□ -1.64
SRP9P49458 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.8□□□□□ -1.64
SRP9P49458 MRPS16P1-201ENST00000523462 412 ntBASIC4.8□□□□□ -1.64
SRP9P49458 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.8□□□□□ -1.64
SRP9P49458 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.8□□□□□ -1.64
SRP9P49458 AL390726.5-202ENST00000564800 256 ntBASIC4.8□□□□□ -1.64
SRP9P49458 RBM22P12-201ENST00000567098 1255 ntBASIC4.8□□□□□ -1.64
SRP9P49458 PRPF19P1-201ENST00000584766 898 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms